Jatropha Genome Database

JcCB0187931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0187931.10 - phase: 1 /partial
         (689 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014171 E2F4,5, putative                                        343   9e-94

>30170.m014171 E2F4,5, putative
          Length = 1161

 Score =  343 bits (173), Expect = 9e-94
 Identities = 302/345 (87%)
 Strand = Plus / Plus

                                                                       
Query: 80  gggctgcgatggtggtgggtcaaaggagttggatgctcatgttaacagattaaaggctga 139
           ||||| ||||| | |||| |||||||||||||| | |||||||| |  | ||||| ||||
Sbjct: 609 gggctacgatgattgtggatcaaaggagttggaggatcatgttaccgaactaaagactga 668

                                                                       
Query: 140 agttgaaagtttacacgctgaagaacacagacttgatgaatctataaggcaaaagcaaga 199
           ||||||||||||||| |||||||| ||||| || ||||||||||||||| |||| |||||
Sbjct: 669 agttgaaagtttacatgctgaagatcacaggctcgatgaatctataagggaaaaacaaga 728

                                                                       
Query: 200 gcttctgaggtcactggaggaagatgaaaataaccaaagatatctctttatgactgagga 259
           |||| ||||| | ||||||||||||||||||||  | ||||||||||| ||||| |||||
Sbjct: 729 gcttttgagggccctggaggaagatgaaaataaaaagagatatctcttcatgacagagga 788

                                                                       
Query: 260 agatattacaagccttccttgcttccagaatcaaacgctcattgcaattaaagctcctca 319
           |||||| ||||||||| |||||| |||||||| ||| ||| ||||||| |||||||||||
Sbjct: 789 agatatcacaagccttgcttgctaccagaatcgaacactccttgcaataaaagctcctca 848

                                                                       
Query: 320 agctagttaccttgaagtccccgatcccgatgaggatattggttgtcctcagtacaaaat 379
            |||||||| |||||||| || ||||||||||||||||||||||  |||||||| |||||
Sbjct: 849 ggctagttatcttgaagttcctgatcccgatgaggatattggttcccctcagtataaaat 908

                                                        
Query: 380 gattgttagaagcaacaccggaccaattgatttatatctgctaag 424
           |||||||||||||| |||||||||||||||| |||| || |||||
Sbjct: 909 gattgttagaagcaccaccggaccaattgatgtatacctcctaag 953



 Score =  123 bits (62), Expect = 1e-27
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                        
Query: 588  tcatctgggatccagaagataattccttcagactgtgatattgatgatgattattggttt 647
            ||||||||| | |||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 1045 tcatctggggttcagaagataactccttcagactgtgatattgacgatgattattggttt 1104

                                                  
Query: 648  cgatcaaatcctgaagtcagcacttcagagttgtgggg 685
            |||||| |||||||||| |||| ||||||  |||||||
Sbjct: 1105 cgatcagatcctgaagtgagcatttcagaactgtgggg 1142