Jatropha Genome Database

JcCB0187481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0187481.10 + phase: 0 /partial
         (443 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29583.m000187 conserved hypothetical protein                          190   5e-48

>29583.m000187 conserved hypothetical protein
          Length = 732

 Score =  190 bits (96), Expect = 5e-48
 Identities = 201/236 (85%)
 Strand = Plus / Plus

                                                                       
Query: 175 tttctggaagtcaagaagaaatatgagacagctgttggaatacttaagaaggagaagatc 234
           |||||||| ||||||| ||||| |||||||||  ||||||||||||  || |||||||||
Sbjct: 160 tttctggatgtcaagaggaaatttgagacagccattggaatacttagaaaagagaagatc 219

                                                                       
Query: 235 accattgctcccgaggatccttcagctgtttctcaatatgcgaagatcatgaagacaatt 294
           ||||||||||| ||||||||  | || || ||||||||||| ||| ||||||||||||||
Sbjct: 220 accattgctcctgaggatccagctgccgtgtctcaatatgcaaaggtcatgaagacaatt 279

                                                                       
Query: 295 agagagaaggctggtttgttctctgagtctgaaagaattaaattcactattgagacacaa 354
           |||||||| |||| ||||||||| |||||  |||||||||| | ||| ||||| ||||  
Sbjct: 280 agagagaaagctgatttgttctccgagtcacaaagaattaagtacaccattgaaacacgt 339

                                                                   
Query: 355 accgtcgatattccagatgctcggacatatttgttgacattgaaggaaattcgaat 410
           ||    ||||||||||| ||||||||||||||||| ||||||| |||||| |||||
Sbjct: 340 acaaaggatattccagacgctcggacatatttgttaacattgagggaaatacgaat 395