Jatropha Genome Database
- JcCB0187031.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0187031.10 + phase: 0
(1377 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29629.m001442 UDP-glucuronate 5-epimerase, putative 402 e-111
29783.m000322 UDP-glucuronate 5-epimerase, putative 90 4e-17
30190.m011013 UDP-glucuronate 5-epimerase, putative 88 2e-16
>29629.m001442 UDP-glucuronate 5-epimerase, putative
Length = 1206
Score = 402 bits (203), Expect = e-111
Identities = 853/1070 (79%), Gaps = 4/1070 (0%)
Strand = Plus / Plus
Query: 269 cttgggaaaaacaagtccgccactctgccacacctcgtcggcctaatggattctccgttc 328
||||||||||||||||||| ||||| | || ||||| | |||| ||| |||| ||
Sbjct: 101 cttgggaaaaacaagtccgtcactcctctactcctcgcagacctagtgggctctcagtct 160
Query: 329 tggtcaccggagcagcaggatttgtcggatcgcactgttcgcttgcgttaaaaaagcgag 388
||||||| ||||| ||||| ||||| ||||||||||| || || || |||||||||||||
Sbjct: 161 tggtcactggagctgcaggttttgtgggatcgcactgctcactcgccttaaaaaagcgag 220
Query: 389 gcgatggagttctcggcatagataatttcaacgactattacgatccgtcgttaaagagag 448
|||| |||||||| ||| | || ||||| ||| |||| || ||||| || | || ||||
Sbjct: 221 gcgacggagttcttggcctggacaattttaacaactactatgatccctcacttaaaagag 280
Query: 449 cgagacagaagcttttaagcaagcatcaggtttttatcattgaaggagatataaatgatt 508
| || || ||||| | ||| || |||||||||||| | ||||| ||||||||||||
Sbjct: 281 ctaggcaacagcttcttctcaaacaccaggtttttatcgtggaaggtgatataaatgatg 340
Query: 509 cgccattgttatctaagcttttcgacgttgtgccttttactcatgtactccatttagcag 568
| ||| | | ||||||||||| || ||||| || ||||| |||| ||| |||| |
Sbjct: 341 gccaattacttgccaagcttttcgatgtggtgccattcactcacatactgcatctagctg 400
Query: 569 cacaagctggagttcgctacgccatgcaaaatccacagtcttacgtcagctcaaacattg 628
| || ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||
Sbjct: 401 ctcaggctggcgttcgctacgctatccaaaacccacaatcttatatcagctcaaacattg 460
Query: 629 caggttttgttaatttactagaaatagcaaaggccgcaaatcctcaacccgccattgttt 688
| ||||| |||||| | || ||| | || || ||||||| || ||||| || ||||| |
Sbjct: 461 ctggtttcgttaatcttcttgaagttgccaaaaccgcaaacccacaacctgcaattgtgt 520
Query: 689 gggcttcttcaagctctgtctatggattaaatacacaagttcctttctccgaatccgacc 748
||||||| || || ||||| ||||| | || || |||| || || || ||| |||
Sbjct: 521 gggcttcgtcgagttctgtttatgggctgaacactgaagtacccttttcagaaatcgata 580
Query: 749 gaacagatcaaccagcaagtctctacgcggccacnnnnnnngccggagaagaaattgccc 808
|||||||||| |||||||| | ||||| || || || || ||||||||||| |
Sbjct: 581 gaacagatcagccagcaagcttatacgcagctacaaagaaagctggtgaagaaattgcgc 640
Query: 809 atacatataaccatatttacggtctttcacttaccggtttacgcttttttactgtctacg 868
| || ||||||||||||||||||||||| || || || ||||| || ||||| || ||||
Sbjct: 641 acacttataaccatatttacggtctttccctaactgggttacgattctttacagtgtacg 700
Query: 869 gtccttggggtagaccggacatggcgtatttcttttttactaaagatattttacacggaa 928
|||| ||||| ||||| || ||||| ||||| || || ||||| ||||| || || || |
Sbjct: 701 gtccatggggaagacccgatatggcatattttttcttcactaaggatatcttgcaaggta 760
Query: 929 aacctatagatgtataccaaacgcaggatgagaagcaggtggcgcgtgacttcacgtaca 988
| | |||||| | || || || || ||| |||| |||||||||||||||||||| ||||
Sbjct: 761 agcaaatagatatttatcagacacaagatcagaaacaggtggcgcgtgacttcacttaca 820
Query: 989 tcgatgatatagtgaaaggatgtgttggcgcattggatacggcggagaaaagcaccggca 1048
| |||||| ||||||||||||| || || || ||||| ||||||||||| || || || |
Sbjct: 821 ttgatgatgtagtgaaaggatgcgtcggagcgttggacacggcggagaagagtacaggaa 880
Query: 1049 gcggtggtaaaaagaaaggaccggctcagttaagagtatataatcttggaaatacttcgc 1108
| ||||| ||||||||||| || ||||| | || || || |||||||||||||| || |
Sbjct: 881 gtggtggaaaaaagaaaggtccagctcaactgagggtgtacaatcttggaaatacctcac 940
Query: 1109 cagttcctgttgggaaattggtggccatatt--agaatctttgttgaacaccaaggcaaa 1166
|||||||||| |||||| ||||| | || || ||||||||| |||| || || || ||
Sbjct: 941 cagttcctgtagggaaactggtgtctatcttggagaatcttt--tgaatactaaagccaa 998
Query: 1167 gaaacatataataaagatgccaagaaatggggacgtgccttacacgcacgctaatgtgag 1226
||||||| | || |||||||||||||||||||| ||||||||||| || |||||||| ||
Sbjct: 999 gaaacatgtcatcaagatgccaagaaatggggatgtgccttacactcatgctaatgtcag 1058
Query: 1227 tttggcttataaggattttgggtataagccaactacagatttgagcagtggattgaggaa 1286
|||||| || || |||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 1059 tttggcatacaaagattttggatacaagccaactacagatttgagtagtggattgaggaa 1118
Query: 1287 gtttgttaaatggtatgtcagttattatgggattcaaacaagggtaaaaa 1336
||||||||| |||||||| | |||||||| ||||| || | ||||||||
Sbjct: 1119 gtttgttaagtggtatgttgggtattatggcattcagactaaggtaaaaa 1168
>29783.m000322 UDP-glucuronate 5-epimerase, putative
Length = 1302
Score = 89.7 bits (45), Expect = 4e-17
Identities = 105/125 (84%)
Strand = Plus / Plus
Query: 808 catacatataaccatatttacggtctttcacttaccggtttacgcttttttactgtctac 867
||||| ||||| |||||||||||||| ||| |||| || || | |||||||||||||||
Sbjct: 766 catacttataatcatatttacggtctgtcaattactgggttgagattttttactgtctac 825
Query: 868 ggtccttggggtagaccggacatggcgtatttcttttttactaaagatattttacacgga 927
||||| ||||||||||| || ||||| ||||||| ||| || | | |||||||||| ||
Sbjct: 826 ggtccatggggtagacccgatatggcttatttctctttcacgagaaatattttacaaggg 885
Query: 928 aaacc 932
|||||
Sbjct: 886 aaacc 890
Score = 67.9 bits (34), Expect = 2e-10
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 976 gacttcacgtacatcgatgatatagtgaaaggatgtgttggcgcattggatacggcgg 1033
|||||||| ||||| |||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 934 gacttcacctacattgatgatatagtgaaaggatgtgttgggtctttggatactgcgg 991
>30190.m011013 UDP-glucuronate 5-epimerase, putative
Length = 1314
Score = 87.7 bits (44), Expect = 2e-16
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 793 ggagaagaaattgcccatacatataaccatatttacggtctttcacttaccggtttacgc 852
||||| |||||||| ||| | ||||| |||||||| ||| | ||| |||| |||||| |
Sbjct: 757 ggagaggaaattgctcattcgtataatcatatttatggtttgtcaattactggtttaagg 816
Query: 853 ttttttactgtctacggtccttggggtagaccggacatggcgtatttcttttttactaaa 912
||||||||||| || || |||||||| || || |||||||| ||||||||||| |||||
Sbjct: 817 ttttttactgtttatggaccttggggaaggcctgacatggcctatttctttttcactaag 876
Query: 913 gatatttt 920
||||||||
Sbjct: 877 gatatttt 884
Score = 61.9 bits (31), Expect = 9e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 538 gtgccttttactcatgtactccatttagcagcacaagctggagttcgctacgccatgcaa 597
|||| ||||||||||||| | |||||||| || |||||||| ||||| || || |||||
Sbjct: 502 gtgcgttttactcatgtaatgcatttagctgctcaagctggtgttcgttatgcaatgcag 561
Query: 598 aatccacagtcttacgtca 616
|||||| ||||||| ||||
Sbjct: 562 aatccaaagtcttatgtca 580