Jatropha Genome Database
- JcCB0186461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0186461.10 + phase: 0 /pseudo
(1536 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30027.m000843 ATATH8, putative 916 0.0
29933.m001441 ATATH13, putative 161 2e-38
>30027.m000843 ATATH8, putative
Length = 1491
Score = 916 bits (462), Expect = 0.0
Identities = 914/1062 (86%), Gaps = 2/1062 (0%)
Strand = Plus / Plus
Query: 453 tagagctgtttatttggcagttctgtttttaccatgcatagctatggctccatttgcaga 512
||||||||||||||| |||||| |||| || || || | | ||||||||||||||||||
Sbjct: 126 tagagctgtttatttagcagttttgttctttccttgtgtggttatggctccatttgcaga 185
Query: 513 ttctcttagcaatgagtttaggaaagcatggcttcatgtagttaggcttacacttgaaag 572
||||| ||| | |||||||||| | |||||| ||| ||| | |||||||||||
Sbjct: 186 ttctcgaagctacaagtttaggaagacttggctttgtgttgttcgctgtacacttgaaaa 245
Query: 573 agcaggaccagcatttatcaaatggggtcaatgggctgcaacaagaccagatctttttcc 632
||||||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 246 agcaggaccggcttttattaaatggggtcagtgggctgcaacaagaccagatctctttcc 305
Query: 633 ccaagatctgtgtgctgaacttgcaagacttcatgctaaagcaccatcacatagtttttc 692
|||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 306 acaagatgtgtgtgccgaacttgctagacttcatactaaagcaccagcacatagttttgg 365
Query: 693 cttcactaaaatgactattgaaagagcatttgggcgtaagttgcatgaaatctttgctaa 752
||||| ||| ||||||||||| | |||||||| |||| | ||| |||||| |||||||
Sbjct: 366 attcaccaaattgactattgaacgtgcatttggacgtacgctgcctgaaatttttgctac 425
Query: 753 ctttgaagaagaacctgtagcatctggaagtgttgctcaagttcatcgagcgactttaaa 812
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 426 ctttgaagaggaacctgtagcatctggaagtgttgctcaagttcatcgagctactttaaa 485
Query: 813 atatagataccctggtaaggagattgaacccattatagttgctgtaaaggttcgacatcc 872
|||| | || ||||||||||||| | |||| ||| | || ||||||||||||||||||||
Sbjct: 486 atatcggtatcctggtaaggagactaaacctattctggtggctgtaaaggttcgacatcc 545
Query: 873 aagtgt-gcagaagcaattagaagggactttgtattaataaattttgtagtccaaaattt 931
|||||| || ||||||||| |||||||||| | ||||||||||||| | ||||||| |
Sbjct: 546 aagtgttgctgaagcaattcgaagggacttcgcgctaataaattttgttg-ccaaaatat 604
Query: 932 caaagcttataccaacactaaaatggtcaagattagaggaaagtatacaacaatttgcgg 991
| ||| |||| || | |||||| ||||| || ||||| ||||| ||||||| ||||| |
Sbjct: 605 ctaagtttattcctaaactaaattggtctaggttagatgaaagcgtacaacagtttgctg 664
Query: 992 ttttcatgatatctcaagttgatctggcaagagaagcagcccatttgagtcgtttcatct 1051
| |||||||| || ||||| ||||| || ||||||||||| |||||||| ||||| ||||
Sbjct: 665 tattcatgatgtcccaagtagatcttgcgagagaagcagctcatttgagccgttttatct 724
Query: 1052 ataatttccggaaatggaaggatgtctctttcccaaggcctctatatcccctggtgcacc 1111
|||||||||| ||| ||||||||||| ||||||| |||||| ||||||||||||||||
Sbjct: 725 ataatttccgtgcatgtaaggatgtctcattcccaaagcctctttatcccctggtgcacc 784
Query: 1112 cagctgttcttgtggaaacctatgaacaaggcaaaagcgtcctgcactatgttgatgaac 1171
||||||| ||||||||||| ||||||||||| ||| | | || |||||||||||||| |
Sbjct: 785 cagctgtacttgtggaaacttatgaacaaggtgaaaacattctacactatgttgatgagc 844
Query: 1172 ttgatggagacaaaagaataagaagtgcccttgcacatattggaacacaagcacttttaa 1231
| || || |||||||||| |||||||||||||| |||||||||||| | |||||||| |
Sbjct: 845 tcgaaggtaacaaaagaattagaagtgcccttgctcatattggaacaaatgcacttttga 904
Query: 1232 agatgcttttgatagataattttatccatgcagacatgcatcctggaaatattcttgttc 1291
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 905 agatgcttttggtagataattttattcatgcagacatgcatcctggaaatattcttgttc 964
Query: 1292 gattaacagatgaaaatatatcacataaacaacttcttggatcaagaccacaagtcatat 1351
||||||| ||||| || |||| |||||||| ||| |||||||||| || ||||| | |
Sbjct: 965 gattaactgatgacaagctatcgcataaacagctttttggatcaaggcctcaagttgttt 1024
Query: 1352 tccttgatgtgggaatgacagctgaactttctaaaagagatcggcataatgtaatagaat 1411
|||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||
Sbjct: 1025 tccttgatgtgggaatgacagctgaactttctaagagagatcggagaaatgtacttgaat 1084
Query: 1412 tctttaaggctgttgctcttctagatggtcgaacagctgcagagtgcatacttagattat 1471
| ||||||||||| || ||||| |||||||| || |||||||||||||||||||| ||
Sbjct: 1085 tttttaaggctgtagcccttcttgatggtcggactgctgcagagtgcatacttaggttgg 1144
Query: 1472 ctaaacagcaaaagtgcccagatcctaaggctttcattgagg 1513
||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 1145 ctaaacagcaaaattgcccaaatcctaaggctttcattgagg 1186
Score = 71.9 bits (36), Expect = 1e-11
Identities = 74/86 (86%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 271 tcaaatttggtggttccacgtgttattgcctttgttattggagagcttgcttggact--- 327
||||||||||| | ||| |||||||||||||| | | ||||||||||||||||||
Sbjct: 22 tcaaatttggtcgctcctggtgttattgcctttatcttcggagagcttgcttggactcga 81
Query: 328 catcgaacgtgggcagaagcagaaag 353
|||||||| |||||||||||||||||
Sbjct: 82 catcgaacatgggcagaagcagaaag 107
>29933.m001441 ATATH13, putative
Length = 1812
Score = 161 bits (81), Expect = 2e-38
Identities = 252/309 (81%)
Strand = Plus / Plus
Query: 985 tttgcggttttcatgatatctcaagttgatctggcaagagaagcagcccatttgagtcgt 1044
||||| ||||||||||| ||||||||||| || ||||| ||||| || ||||| || ||
Sbjct: 1009 tttgcagttttcatgatgtctcaagttgaccttgcaagggaagctgctcatttaagccgc 1068
Query: 1045 ttcatctataatttccggaaatggaaggatgtctctttcccaaggcctctatatcccctg 1104
|| || ||||||||||||| |||||||||||| ||||| |||| |||| ||||||| ||
Sbjct: 1069 tttatttataatttccggagatggaaggatgtttcttttccaaagcctgtatatccacta 1128
Query: 1105 gtgcacccagctgttcttgtggaaacctatgaacaaggcaaaagcgtcctgcactatgtt 1164
||||| || |||||| | |||||||| ||||| ||||| |||| ||| |||| ||||
Sbjct: 1129 gtgcatcctgctgttttagtggaaacttatgagcaaggggaaagtgtctcacactttgtt 1188
Query: 1165 gatgaacttgatggagacaaaagaataagaagtgcccttgcacatattggaacacaagca 1224
||||||||||| ||| | | | || | |||||| ||||| || ||||| || || |||
Sbjct: 1189 gatgaacttgagggacatgatcggattaaaagtgctcttgctcacattgggactcatgca 1248
Query: 1225 cttttaaagatgcttttgatagataattttatccatgcagacatgcatcctggaaatatt 1284
||| | || ||||||||| | || || ||||| ||||||||||||||||| ||||| |||
Sbjct: 1249 cttctgaaaatgcttttggtggacaactttattcatgcagacatgcatccgggaaacatt 1308
Query: 1285 cttgttcga 1293
|||||||||
Sbjct: 1309 cttgttcga 1317