Jatropha Genome Database
- JcCB0186361.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0186361.10 - phase: 0
(1218 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28153.m000278 conserved hypothetical protein 438 e-122
>28153.m000278 conserved hypothetical protein
Length = 1035
Score = 438 bits (221), Expect = e-122
Identities = 598/721 (82%), Gaps = 2/721 (0%)
Strand = Plus / Plus
Query: 157 gagaaagataagcggtacaaagtctgcgcacgagttgtcaaagaggtcctaaacgaaccg 216
|||||||||||||| |||||| | || |||| || || |||||||| ||||| |||||
Sbjct: 109 gagaaagataagcgttacaaactttgttcacgcgtcgttaaagaggtactaaatgaacca 168
Query: 217 ggtcaagttatcccgctcagataccttgagaaaaggcgcgagagattacgcctcaatata 276
||||||||||| || ||| ||||| |||| |||||||| || || || ||||| || |
Sbjct: 169 ggtcaagttattcctctccgatacattgaaaaaaggcgggaaaggttgcgccttcatgtc 228
Query: 277 aaagtcaaaacttttattaatcaaaatccaggcctctttgatacttactacgacagaatc 336
||||| || || ||| ||||||| || || || || || | ||||||||| || |||||
Sbjct: 229 aaagttaagacctttgttaatcagaaccctgggcttttcggtacttactatgatagaatt 288
Query: 337 aaacccaaatcagaatctgtcttgtttttgcgtgctagtgatcg-gttaaggaatttttt 395
||||||||| |||| ||||| |||||||||||| ||||| | || ||||||||| ||
Sbjct: 289 aaacccaaaacagatcctgtcatgtttttgcgtgtcagtgacagagtaaaggaatttctt 348
Query: 396 ggaagaggagaaaaggattcagttggaaaatgaggggttgattgtttcaagactctgtaa 455
| |||| ||||||||||||||||| ||||||||||||| ||||| || | | | |||||
Sbjct: 349 g-aagaagagaaaaggattcagtttaaaaatgaggggttaattgtgtctaaattgtgtaa 407
Query: 456 attgttaatgatggcaaaggataaggtactcagtgcagataaattggttcacgtgaagag 515
||| | |||||||||||| |||| || || ||||| ||||| ||||||| || |||||
Sbjct: 408 gttgcttatgatggcaaagaataaagtgcttagtgctgataagctggttcatgttaagag 467
Query: 516 agaatttggtttacctaacgattttttggtcaatttggtgcccaaataccccaattattt 575
||| |||||||| ||||| |||||| |||| || |||||||| || ||||| ||||||||
Sbjct: 468 agagtttggtttccctaatgattttatggttaacttggtgcctaagtacccaaattattt 527
Query: 576 taggcttacagggtgtcctggagaggggaaatcgtttttggagttggttgagtggaactc 635
|||| | | || |||||||| ||||| |||||||| |||||||||||||| |||||| |
Sbjct: 528 taggttaattggatgtcctggtgagggaaaatcgttcttggagttggttgattggaaccc 587
Query: 636 tgagttcgctaaatcgtttattgagcaaagagctgaagaggagtctcaattgacagggat 695
|||||| |||||||| ||||||||| |||||||||||||||||| | | || ||
Sbjct: 588 tgagtttgctaaatcagttattgagctaagagctgaagaggagtcaaggctaatgggaat 647
Query: 696 tcgggttaggcctaatttcaattataaacttccaccagggtttttcctgaggaaggaaat 755
||| |||||||| ||||| | |||||| ||||| || ||||||||| | | |||||||||
Sbjct: 648 tcgagttaggccaaattttagttataagcttcctcctgggtttttcttaaagaaggaaat 707
Query: 756 gagggagtgggtaagagattggttggagcttgattatatttcaccatacgaggatgtgtc 815
|||||||||||| || |||||||| ||||| |||||||| |||||||| | |||||||||
Sbjct: 708 gagggagtgggttagggattggttagagctagattatatctcaccatatgtggatgtgtc 767
Query: 816 acacttggatcaatcttcaccagaaatggagaagaggacagttggagttttccatgagtt 875
||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 768 acatttggatcaagcttcaccagaaatggagaagaggacagttggggttttccatgagtt 827
Query: 876 g 876
|
Sbjct: 828 g 828
Score = 65.9 bits (33), Expect = 5e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1112 aggggtggcaagagagagcagatcagctgaagacacaaaaggaagtgttaaaaaatgaca 1171
|||| |||| |||||||||||| ||||||| | | |||||||||||| ||| ||| ||||
Sbjct: 857 agggttggctagagagagcagagcagctgaggtcgcaaaaggaagtggtaacaaaggaca 916
Query: 1172 tggagatgatggc 1184
|||| ||||||||
Sbjct: 917 tggaaatgatggc 929