Jatropha Genome Database

JcCB0185851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0185851.10 - phase: 0 
         (192 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29596.m000699 mads box protein, putative                              202   5e-52

>29596.m000699 mads box protein, putative
          Length = 789

 Score =  202 bits (102), Expect = 5e-52
 Identities = 162/182 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggagagggaagatagtgataaggagaatagacaattcgacgagcaggcaagtgacg 60
           |||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 1   atggggagagggaagatagtgataagaagaatagacaattccacaagcaggcaagtgacg 60

                                                                       
Query: 61  ttttcgaagagaaggaatggactgttgaagaaggcaaaggagcttgcgatcctatgcgac 120
           ||||| || |||||||||||| | |||||||||||||||||||| ||||| || || |||
Sbjct: 61  ttttcaaaaagaaggaatggattattgaagaaggcaaaggagctcgcgattctttgtgac 120

                                                                       
Query: 121 gcggaagttggagtcataatattctctagcactggaaagctctacgatttcgctagcacc 180
           || |||||||||||  | ||||| |||||||| || ||||||||||||||| ||||| ||
Sbjct: 121 gctgaagttggagttgtgatattttctagcaccggcaagctctacgatttctctagctcc 180

             
Query: 181 ag 182
           ||
Sbjct: 181 ag 182