Jatropha Genome Database
- JcCB0184991.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0184991.10 + phase: 0 /pseudo/partial
(2087 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006387 lipoxygenase, putative 620 e-177
30169.m006389 lipoxygenase, putative 137 3e-31
>30169.m006387 lipoxygenase, putative
Length = 2370
Score = 620 bits (313), Expect = e-177
Identities = 1022/1258 (81%), Gaps = 14/1258 (1%)
Strand = Plus / Plus
Query: 50 aaatacgaagcagaatttgatgttccagaagattttggagatgtgggtgccgt-ttcgtg 108
||||| |||||||| || || |||||| | ||||||||||| || |||||||| || |||
Sbjct: 88 aaatatgaagcagagttcgaagttccatatgattttggagaagttggtgccgtatttgtg 147
Query: 109 gaaa-tgagcattattctgagatctttcttcaggatatagtgcttgatgggtttccccat 167
|||| ||| ||| || ||||| || |||||||||||||| |||||||| || || ||
Sbjct: 148 gaaaatgaacatcataaggagatgttccttcaggatatagtccttgatggtttccctcaa 207
Query: 168 ggtcctgttaatatcacttctgcttcttgggttcactccaagtatgataacaagcagaaa 227
|| ||| ||||| |||| | ||||||||||||||||||||||| || || ||||||
Sbjct: 208 ggccctcttaatgtcacctgtgcttcttgggttcactccaagttcaccaataaccagaaa 267
Query: 228 agagtctttttcaccagtgagtcttacttaccatcacagacgccgagtggaataaagagg 287
|||||||| ||||||| |||| ||||| ||||||||||| || | ||||||| ||||
Sbjct: 268 agagtcttcttcaccaccaagtcatacttgccatcacagacaccaatcggaataaggagg 327
Query: 288 ctacgagaggaagagcttatgttcttgcgaggaaatggacaaggagagcgtcagttcggc 347
| ||||| ||||||||| | |||||||||||||| |||||||| || || | ||
Sbjct: 328 ttgcgagaagaagagcttgctcttttgcgaggaaatgggcaaggagaacgcaaggtgggt 387
Query: 348 gaaaggatatacggttatgatgtatataacgatcttggtgatcctgatagtaacccggac 407
|| || |||| | ||||||||| ||||| ||||||||| |||| || || || |
Sbjct: 388 gagagagtatatgattatgatgtttataatgatcttggtaatcccgacggtcacttaaag 447
Query: 408 tttgcaagaccagtacttggcggcaaacaacgtccatatcctagacgatgtcgtactgga 467
||| ||||||||||||||| ||| || | | ||| ||||||||||||||||| || |||
Sbjct: 448 cttgaaagaccagtacttggtggcgaagatcatccttatcctagacgatgtcgaacagga 507
Query: 468 cggccaagatgcggaacagatccatcatcggagaaaaggaaaagtaacttctatgttcct 527
||||| ||||| | ||||| |||||||||||| |||||||||| ||| ||||| |||
Sbjct: 508 cggccccgatgcaaagcagattcatcatcggagataaggaaaagtggcttttatgtgcct 567
Query: 528 agagatgaagca------------aagcaactaacattcccagccaagactatatattca 575
|||||||| ||| ||||| |||||||| ||||||||||| | || |
Sbjct: 568 agagatgaggcattctcagaagtgaagcatttaacattctcagccaagactttgtaccta 627
Query: 576 ttacttcatgcactggcaccatcattagaaaatgtgattattgattctgaacttggattc 635
|| || |||| ||| ||||||| | | || |||||| ||||| |||||||||||||
Sbjct: 628 ctatttaatgctttggtaccatcaattggaagtgtgatagttgatcatgaacttggattc 687
Query: 636 ccttactttaaagctatagattcactgatcaaagaagggattcctatgcctcccctttca 695
|| ||||| | ||| || ||||||||| ||| ||||||||| | |||||||||||| |
Sbjct: 688 ccatacttcacagccattgattcactgttcactgaagggatttccatgcctccccttgaa 747
Query: 696 agagagggcttctggcaaacaatcatgcctcggcttttcaaggctatcactgatgggaaa 755
|| || || || ||||||| || | ||||| ||||||||| ||||||||||||| |||
Sbjct: 748 agcgaaggtttttggcaaaaaacgctccctcgccttttcaagtctatcactgatggcaaa 807
Query: 756 ggtgttttgagctttgagagcacacaaacatcagagagagaaaaattcttttggttaacg 815
| |||| || ||||||||| | | | || |||||||||| |||||||||||| ||| |
Sbjct: 808 gatgttctgcgctttgagacccctaagaccacagagagagacaaattcttttggctaagg 867
Query: 816 gatgaagaatttgctaggcaaactattgctggtctcaacccttgcagcatacaattgatc 875
|||||||||||||| ||||| ||| |||||||||||||||| | ||| ||||| ||| ||
Sbjct: 868 gatgaagaatttgccaggcagactcttgctggtctcaacccgtacagtatacagttggtc 927
Query: 876 gaagaatggccactgaagagtaaacttgatcctgagatatatggaccgccggaatcagca 935
||||||||||| | | |||||||||||| |||||||||||||||||||| || || ||
Sbjct: 928 aaagaatggccaataacgagtaaacttgaccctgagatatatggaccgccagagtcgaca 987
Query: 936 attacaacagaaataattgaagcagaaattggagggattgttcaagtttgtgaggccata 995
||||||||||||||| |||| |||||||||||||| ||||| ||| | |||||||||
Sbjct: 988 attacaacagaaatagttgaggcagaaattggaggaattgtaagcgttcgggaggccata 1047
Query: 996 gaacaaaagaagcttttcatcttagattatcatgatctgttgttaccatttgtgagcaaa 1055
||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 1048 caacaaaagaagctgttcatcctagattatcatgatgttttgttaccatttgtgagcaaa 1107
Query: 1056 gtaagggaacttaacggcagaacactatatggctcacggacagtgctattcctaacccct 1115
||||| |||||||| |||| |||| ||||||| ||| ||||| | | || ||||| ||
Sbjct: 1108 gtaagagaacttaaaggcacaacattatatgggtcaaggacactattctttctaacaccc 1167
Query: 1116 actggcatattaaggcccatagccattgagttgactcgcccacccatggatggaaagcct 1175
| ||||| ||||| || | ||||||||| | |||||||||||||||||||||||||||
Sbjct: 1168 aatggcacattaaaaccagtggccattgagctcactcgcccacccatggatggaaagcct 1227
Query: 1176 cagtggaagcaagtgtacactaacagttgggattccacaggtttctggctctggaggcta 1235
|||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||
Sbjct: 1228 cagtggaagcaagtgttcacacacacctgggattccacaggttgctggctctggaggcta 1287
Query: 1236 gccaaagtacatgtccttgctcatgactctggttatcatcaacttgttagtcattggc 1293
||||||| |||||| |||||||| |||||||||||||| || || |||||||||||||
Sbjct: 1288 gccaaagcacatgttcttgctcacgactctggttatcaccagctcgttagtcattggc 1345
Score = 577 bits (291), Expect = e-163
Identities = 663/787 (84%)
Strand = Plus / Plus
Query: 1301 ctatggagttcagctctgttgcctatgataaattttggaggtttgatcatcaggcactac 1360
|||||||| | || ||| ||| ||||||||| |||||| ||||||| |||||| ||||||
Sbjct: 1532 ctatggagcttagttcttttgtctatgataagttttggcggtttgaccatcagtcactac 1591
Query: 1361 ccaatgacctaattaacaggggcatggctgttgaggatgaaaaggctccgcacggcctaa 1420
|||| ||||| |||| ||||||||| || ||||| ||| || |||| || |||||||
Sbjct: 1592 ccaaagacctgattagcaggggcattgcagttgaagatccaacttctccacatggcctaa 1651
Query: 1421 aacttacgattgaagactacccttttgcaaacgatggtctaattttatgggacatcatca 1480
||||||| |||||||||||||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 1652 aacttacaattgaagactacccttttgctaatgatggtctaattttgtgggacattatca 1711
Query: 1481 aaagttggataactgactacgtaaatcactactatcctgaaccagaccttgtcgcgtccg 1540
|||||||| | || || || ||||||||||||||||| || ||| |||||| | ||| |
Sbjct: 1712 aaagttgggttacagattatgtaaatcactactatccagatccaagccttgtagagtctg 1771
Query: 1541 atgaagagatccaagcatggtggagggaaattcgaactataggacacgctgacaaaaagg 1600
|| ||||| ||||||||||||||| ||||||||||| | ||||||| ||||| ||||
Sbjct: 1772 atcaagagctccaagcatggtggacagaaattcgaacagtgggacacggcgacaagaagg 1831
Query: 1601 acgaaccatggtggcctcagcttagaacaccccaggatctaattgatttcgccacaacta 1660
| ||||||||||||||| |||| | |||||| || || |||||||| | | ||| | ||
Sbjct: 1832 atgaaccatggtggcctgagctaaaaacaccacaagacctaattgaaatagtcactatta 1891
Query: 1661 tggcatgggtagcctcaggtcaacatgctgcagttaactttggacaatatgcatttggag 1720
| |||||| ||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 1892 tagcatggacagcttcaggtcatcatgctgcagtgaactttggacaatatgcatttggag 1951
Query: 1721 gttattttcctaataggcctacaattgcaagaataaaaatgccaagtgaagaccccacag 1780
|||| |||||||| ||||| || ||||| |||| ||||||||||| ||| || || ||||
Sbjct: 1952 gttactttcctaacaggccaaccattgctagaaaaaaaatgccaaatgaggatccaacag 2011
Query: 1781 aagaagactggaaatttttcttagaaaatcctggggcagtactattagctactttccctt 1840
||||||||||||| || ||||| | || || | ||||||||||||||| |||||||||
Sbjct: 2012 aagaagactggaatttcttcttgcataaacccgaggcagtactattagcaactttcccta 2071
Query: 1841 caaagcttcaggcaacaagagttgtggctgctttaaacgtgttatcgaaccattctcctg 1900
|||||||||||||||||| ||| ||||||| | | || |||||||| || ||||||||||
Sbjct: 2072 caaagcttcaggcaacaacagtagtggctgttctcaatgtgttatccaatcattctcctg 2131
Query: 1901 atgagaagtacattggggaggaaatggaaccatcatgggctgatgatccgattataaagg 1960
||||| |||| ||||||||| ||| ||||| | ||||||||||||| ||||||||||| |
Sbjct: 2132 atgaggagtatattggggagcaaaaggaacaagcatgggctgatgaaccgattataaaag 2191
Query: 1961 cagcttttgagaagttcagaggaagattgaaggagttagaaggaatcattgatgaaagaa 2020
|||||||||||||||||| | || ||||||||||||||||||| |||||||||||||
Sbjct: 2192 cagcttttgagaagttcaattgcaggctgaaggagttagaaggaattattgatgaaagaa 2251
Query: 2021 ataataacaagaacttgaaaaacagaaatggagctggcattgtcccatatgagcttttga 2080
|| ||||| | | ||||| ||| ||||||| ||||| ||| | |||||| |||||||||
Sbjct: 2252 attgtaacagggagttgaagaaccgaaatggtgctggtattttgccatatcagcttttga 2311
Query: 2081 agccatt 2087
| |||||
Sbjct: 2312 aaccatt 2318
>30169.m006389 lipoxygenase, putative
Length = 2703
Score = 137 bits (69), Expect = 3e-31
Identities = 336/425 (79%)
Strand = Plus / Plus
Query: 1663 gcatgggtagcctcaggtcaacatgctgcagttaactttggacaatatgcatttggaggt 1722
||||||||| |||||||||| ||||||||||| ||||||||||||||||| | || ||
Sbjct: 2227 gcatgggtaacctcaggtcaccatgctgcagtgaactttggacaatatgcgtatgcgggc 2286
Query: 1723 tattttcctaataggcctacaattgcaagaataaaaatgccaagtgaagaccccacagaa 1782
||||| |||||||| ||||||| ||| ||| | ||||||||||||||||| || || ||
Sbjct: 2287 tatttccctaatagacctacaactgctagattgaaaatgccaagtgaagatccgactgat 2346
Query: 1783 gaagactggaaatttttcttagaaaatcctggggcagtactattagctactttcccttca 1842
|||| |||||| | || ||||| |||| | ||||| || | || |||||||||
Sbjct: 2347 gaaggttggaaaatgtttgcggaaaaacctgaagttgtacttttgacaacgttcccttca 2406
Query: 1843 aagcttcaggcaacaagagttgtggctgctttaaacgtgttatcgaaccattctcctgat 1902
|| | |||||||||| ||| |||||| |||| | |||||||| |||||||||||||||
Sbjct: 2407 caggtccaggcaacaaaagtgatggctgttttagatgtgttatcaaaccattctcctgat 2466
Query: 1903 gagaagtacattggggaggaaatggaaccatcatgggctgatgatccgattataaaggca 1962
|| | || || || ||| |||| || ||| | |||||||| ||||| | ||||| |||
Sbjct: 2467 gaagaatatataggagagaaaatagagccagcctgggctgaggatcctaacataaaagca 2526
Query: 1963 gcttttgagaagttcagaggaagattgaaggagttagaaggaatcattgatgaaagaaat 2022
|| ||||| |||||| ||||| |||||||| | ||||| || || |||||||| |||
Sbjct: 2527 gcatttgaaaagttcgctggaaggttgaaggaactggaagggattatcgatgaaaggaat 2586
Query: 2023 aataacaagaacttgaaaaacagaaatggagctggcattgtcccatatgagcttttgaag 2082
||| | ||||| || || ||||||||||| ||||| || |||||||||||||||
Sbjct: 2587 gctaatccaagtttgaagaataggaatggagctggaattgtgccttatgagcttttgaag 2646
Query: 2083 ccatt 2087
|||||
Sbjct: 2647 ccatt 2651
Score = 75.8 bits (38), Expect = 1e-12
Identities = 382/492 (77%), Gaps = 6/492 (1%)
Strand = Plus / Plus
Query: 804 ttttggttaacggatgaagaatttgctaggcaaactattgctggtctcaacccttgcagc 863
|||||||| | |||||| ||||||| | | |||||| | |||||||| ||||| |||
Sbjct: 1189 ttttggtttagggatgaggaatttggtcgccaaactctagctggtctaaacccgatgagc 1248
Query: 864 atacaattgatcgaagaatggccactgaagagtaaacttgatcctgagatatatggaccg 923
|||||||| || |||||||| | |||||| || | |||||||| || ||||| |||
Sbjct: 1249 ttacaattggtcacggaatggcctttaaagagtgaattggatcctgaaatctatgggccg 1308
Query: 924 ccggaatcagcaattacaacagaaataattgaagcag-aaattggagggattgttcaagt 982
|||||||||||||| || |||||||| |||| ||||| |||| ||||| || | |||
Sbjct: 1309 ccggaatcagcaatcaccacagaaatgattg-agcagcaaatccgagggtttatgacagt 1367
Query: 983 ttgtgaggccatagaacaaaagaagcttttcatcttagattatcatgatctgttgttacc 1042
| ||||| ||| ||||||||||||| ||||| | || || || ||| |||| |||||
Sbjct: 1368 tgaagaggctataaaacaaaagaagctgttcatgcttgactaccacgatttgttcttacc 1427
Query: 1043 atttgtgagcaaagtaagggaacttaacggcagaacactatatggctcacggacagtgct 1102
|||||||||||| ||||| | ||| | || ||| |||| || || |||||| | |
Sbjct: 1428 atttgtgagcaaggtaagacagcttgaaaacaccacattatacgggtctcggacaatttt 1487
Query: 1103 attcctaacccctactggcatattaaggcccatagccattgagttgactcgcccacccat 1162
||| |||||||| ||||| ||| |||| |||| |||||| | |||||||| || ||
Sbjct: 1488 cttcttaacccctgatggcacattgcggccactagctattgagctcactcgcccgccgat 1547
Query: 1163 ggatggaaagcctcagtggaagcaagtgtac--actaacagttgggattccacaggtttc 1220
||| |||||||| ||||||||| | | ||| || ||| |||| |||| || ||| |
Sbjct: 1548 ggacggaaagccacagtggaaggatgcttacgtaccaac--ttggcattctacgggtgtt 1605
Query: 1221 tggctctggaggctagccaaagtacatgtccttgctcatgactctggttatcatcaactt 1280
||||| |||||||| ||||||| ||||||||||| ||||| ||||| ||||| ||||||
Sbjct: 1606 tggctttggaggcttgccaaagctcatgtccttgcacatgaatctggctatcaccaactt 1665
Query: 1281 gttagtcattgg 1292
|||| ||||||
Sbjct: 1666 attagccattgg 1677
Score = 56.0 bits (28), Expect = 9e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 195 tgggttcactccaagtatgataacaagcagaaaagagtctttttcaccagtgagtcttac 254
|||||||| ||||| |||| ||||||| ||||||||||| ||| | | | |||| |||
Sbjct: 568 tgggttcatgccaagaatgacaacaagcgtaaaagagtcttcttcgctaataagtcatac 627
Query: 255 ttaccatcacagacgccgagtgga 278
||||||||| ||||||||| ||||
Sbjct: 628 ttaccatcagagacgccgaatgga 651