Jatropha Genome Database

JcCB0184671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0184671.10 + phase: 0 
         (159 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29269.m000246 protein translocase, putative                           192   4e-49

>29269.m000246 protein translocase, putative
          Length = 480

 Score =  192 bits (97), Expect = 4e-49
 Identities = 130/141 (92%)
 Strand = Plus / Plus

                                                                       
Query: 13  aggagcatctcaacagctatctctgctggagcagcactggcagtgacttctgcagttatt 72
           |||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||| |||||
Sbjct: 334 aggagcatttcaacagctatgtctgctggagctgcactagcagtcacttctgcacttatt 393

                                                                       
Query: 73  gatgctggaggtcagaccacgagaatagacaatggcaaggaatactacccttacaccacc 132
           |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 394 gatgctggaggtcagaccacaagaatagacaatggcaaggagtactacccctacaccacc 453

                                
Query: 133 aagaaaagatccactgctgag 153
           || ||||||||||||| ||||
Sbjct: 454 aaaaaaagatccactgttgag 474