Jatropha Genome Database
- JcCB0183341.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0183341.20 - phase: 0 /pseudo/partial
(1313 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30078.m002329 Auxin response factor, putative 682 0.0
27538.m000327 Auxin response factor, putative 264 1e-69
27494.m000045 Auxin response factor, putative 159 5e-38
29848.m004631 phopholipase d alpha, putative 90 4e-17
29908.m005953 Auxin response factor, putative 58 1e-07
>30078.m002329 Auxin response factor, putative
Length = 2109
Score = 682 bits (344), Expect = 0.0
Identities = 613/702 (87%), Gaps = 3/702 (0%)
Strand = Plus / Plus
Query: 393 tgaagcagtaattgaagctgctagtcttgctgctaatggaaaaccgtttgaggttgttta 452
|||| |||| || |||||||||| ||||||||||||||| | || |||||||| |||||
Sbjct: 852 tgaatcagttatagaagctgctacccttgctgctaatggacagccttttgaggtagttta 911
Query: 453 ttatccgagggctagcactcctgagttttgtgtaaaagcttctttagttaaagcagcatt 512
|| || | ||||| ||||||||||| ||||| || |||||| | || ||||| |||||
Sbjct: 912 ctaccctcgagctagtactcctgagttctgtgttaaggcttctatggtgaaagctgcatt 971
Query: 513 gcagatccggtggtgttcagggatgaggtttaaaatggcttttgaaactgaagattcttc 572
||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 972 tcagatccggtggtgttcggggatgaggtttaaaatggcatttgaaactgaggattcttc 1031
Query: 573 tagaattagttggtttatgggtactatttcttctgttcaagttgctgatcctattcgttg 632
| ||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||
Sbjct: 1032 acggattagctggtttatgggaactattgcttctgttcaagttgctgatcctcttcgttg 1091
Query: 633 gcccgattcaccatggaggcttctccaggtaacatgggacgagcctgatttgcttcaaaa 692
||||||||| ||||||||||| |||||||| || ||||| || ||||| ||||| |||||
Sbjct: 1092 gcccgattcgccatggaggctcctccaggttacttgggatgaacctgacttgctccaaaa 1151
Query: 693 tgtgaaacgtgtaagcccgtggctagtggaattggtatcgaacatgcccaccattcatct 752
|||||| ||||| ||||| |||||||| ||||||||||| ||||||||| ||| |||||
Sbjct: 1152 tgtgaagcgtgtgagcccatggctagtagaattggtatcaaacatgcccgtcatccatct 1211
Query: 753 atctcccttctcaccgccaaggaagaagttgagactgccacaacaccctgatttccccct 812
|| || |||||||| |||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1212 gtccccattctcaccaccaaggaagaagttgagaatgcctcaacaccctgatttccccct 1271
Query: 813 cgatggacaatttccaattccaacgttttccggcaatctccttgggcccagcagcccctt 872
||| | ||||||||| ||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 1272 tgatagccaatttccacttccaacgttttccggcaacctccttgggcctaccagcccttt 1331
Query: 873 tggttgtctaccagacaacactactcctgctggcatgcagggagccaggcatgctcatta 932
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 tggttgtctaccagataac---actcctgctggcatgcagggagccaggcatgctcatta 1388
Query: 933 tggtctatctttatcagatctccaccttaataaactgcatacaggtctaattccagctgg 992
||||||| ||||||||||||||| ||| ||||||||||| ||| ||||| ||| |||||
Sbjct: 1389 tggtctacctttatcagatctccgcctcaataaactgcagacaagtctatttctggctgg 1448
Query: 993 tttccccccactacttgatcatactgctacacacactagaacctcaaatggtcctataat 1052
|||||| |||| |||||||||| |||||||||||| || | |||||||||| |||| ||
Sbjct: 1449 tttcccgccaccacttgatcattctgctacacacagtatatcctcaaatggccctaccat 1508
Query: 1053 tcaaaagcctagcatgagtgaaagtgtatcttgtgtcctaac 1094
| |||||||||||||||||| |||||||| ||||| |||||
Sbjct: 1509 tgtaaagcctagcatgagtgagagtgtatcctgtgtgctaac 1550
Score = 283 bits (143), Expect = 1e-75
Identities = 248/283 (87%)
Strand = Plus / Plus
Query: 1 gatccacctgttcaaacaattcttgctaaagatgttcatggagaaacatggaaatttagg 60
||||| |||||||| || ||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 472 gatccgcctgttcagaccattcttgctaaggatgttcatggagaaacatggaagtttaga 531
Query: 61 catatttatagaggaacaccaagaagacatcttttaacaactgggtggagtacttttgtc 120
||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 532 catatttatagaggaacaccaaggaggcatcttttaactactggatggagtacttttgtg 591
Query: 121 aatcataagaaattagtagcaggagattcaatagtgtttttgagagcagataatggtgat 180
||||||||||| ||||| ||||| || || ||||| ||||| |||||||| || || |||
Sbjct: 592 aatcataagaagttagttgcaggggactctatagtatttttaagagcagagaacggagat 651
Query: 181 ctttgcgtaggaattcgaagagcgaaaagaggaattggaggtagtcctgagtcttcttgg 240
||||| | |||||||||||||| || || ||| |||| ||| |||| |||||||| |||
Sbjct: 652 ctttgtattggaattcgaagagctaagaggggagttggtggtggtcccgagtcttcatgg 711
Query: 241 aatccagcaggtgggaattgtgttatgccttatggagggttta 283
||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 712 aatccggccggtgggaattgtgttatgccttatggaggattta 754
>27538.m000327 Auxin response factor, putative
Length = 2130
Score = 264 bits (133), Expect = 1e-69
Identities = 450/555 (81%), Gaps = 3/555 (0%)
Strand = Plus / Plus
Query: 417 tcttgctgctaatggaaaaccgtttgaggttgtttattatccgagggctagcactcctga 476
||||||||| |||||| ||||||||||||||||||| ||||| |||| ||||| || ||
Sbjct: 837 tcttgctgccaatggacaaccgtttgaggttgtttactatccacgggcaagcacaccaga 896
Query: 477 gttttgtgtaaaagcttctttagttaaagcagcattgcagatccggtggtgttcagggat 536
||||||||| || || |||| |||| ||| | ||||| |||||| || || ||
Sbjct: 897 gttttgtgttaaggcctcttcggttagagcttcgaccaggatccagtggtgctctggaat 956
Query: 537 gaggtttaaaatggcttttgaaactgaagattcttctagaattagttggtttatgggtac 596
||||||||| ||||| ||||| || || |||||||| || ||||| ||||| ||||||||
Sbjct: 957 gaggtttaagatggcctttgagacagaggattcttcaaggattagctggttcatgggtac 1016
Query: 597 tatttcttctgttcaagttgctgatcctattcgttggcccgattcaccatggaggcttct 656
|||| |||||||||| || |||||||| ||||| ||||| ||||||| ||| | |||||
Sbjct: 1017 tattgcttctgttcaggtggctgatccgattcggtggcctaattcaccttggcgacttct 1076
Query: 657 ccaggtaacatgggacgagcctgatttgcttcaaaatgtgaaacgtgtaagcccgtggct 716
||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| ||| |
Sbjct: 1077 ccaggtaacatgggatgagccagatttgctgcaaaatgtaaaacgtgtcagcccatggtt 1136
Query: 717 agtggaattggtatcgaacatgcccaccattcatctatctcccttctcaccgccaaggaa 776
|| ||||||||||| || ||||| ||| || || || ||||||||||| ||||| ||
Sbjct: 1137 ggttgaattggtatcaaatatgccagtcatccacctgtcacccttctcacctccaagaaa 1196
Query: 777 gaagttgagactgccacaacaccctgatttccccctcgatggacaatttccaattccaac 836
||||||| | || || |||||| || |||||||| || || ||||||| | | || |
Sbjct: 1197 gaagttgcggctcccgcaacacttagacttcccccttgacggccaatttcaattgccgtc 1256
Query: 837 gttttccggcaatctccttgggcccagcagcccctttggttgtctaccagacaacactac 896
||||| ||||| | |||||| || |||||||| || |||||||| | || ||| ||
Sbjct: 1257 tttttcaggcaacccccttggccctagcagccctttgtgttgtctatctgataac---ac 1313
Query: 897 tcctgctggcatgcagggagccaggcatgctcattatggtctatctttatcagatctcca 956
|||||| ||||| ||||||||||||||||| || | ||| |||||||||||||||||||
Sbjct: 1314 tcctgcaggcatacagggagccaggcatgcgcaatttgggatatctttatcagatctcca 1373
Query: 957 ccttaataaactgca 971
||||| ||||||||
Sbjct: 1374 gcttaacaaactgca 1388
Score = 123 bits (62), Expect = 3e-27
Identities = 152/182 (83%)
Strand = Plus / Plus
Query: 1 gatccacctgttcaaacaattcttgctaaagatgttcatggagaaacatggaaatttagg 60
|||||||| ||||| || || ||||||| ||||||||||| || | |||||| || |||
Sbjct: 436 gatccaccggttcagacggttgttgctaaggatgttcatggtgagatatggaagttcagg 495
Query: 61 catatttatagaggaacaccaagaagacatcttttaacaactgggtggagtacttttgtc 120
||||||||||| || ||||||||||| ||||| ||||| ||||| ||||||||||| ||
Sbjct: 496 catatttatagggggacaccaagaaggcatctgttaactactggttggagtactttcgta 555
Query: 121 aatcataagaaattagtagcaggagattcaatagtgtttttgagagcagataatggtgat 180
|| || || || |||||||| || |||||||| |||||||| ||||| || | |||||||
Sbjct: 556 aaccagaaaaagttagtagctggtgattcaattgtgtttttaagagctgaaagtggtgat 615
Query: 181 ct 182
||
Sbjct: 616 ct 617
>27494.m000045 Auxin response factor, putative
Length = 1773
Score = 159 bits (80), Expect = 5e-38
Identities = 233/284 (82%)
Strand = Plus / Plus
Query: 512 tgcagatccggtggtgttcagggatgaggtttaaaatggcttttgaaactgaagattctt 571
||||||| | ||||||| | ||||||||||| |||||| ||||||| ||||| ||||| |
Sbjct: 947 tgcagattcagtggtgtcctgggatgaggttcaaaatgccttttgagactgaggattcat 1006
Query: 572 ctagaattagttggtttatgggtactatttcttctgttcaagttgctgatcctattcgtt 631
| | ||||| ||||||||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 1007 cccggattagctggtttatgggaactatatcttctgttcaggttgctgatcccatccgct 1066
Query: 632 ggcccgattcaccatggaggcttctccaggtaacatgggacgagcctgatttgcttcaaa 691
|||| |||| || ||| ||||||| ||||| ||||||| ||||| ||||| ||||| |
Sbjct: 1067 ggcctaattctccgtggcggcttctgcaggtggcatgggatgagccagatttacttcaga 1126
Query: 692 atgtgaaacgtgtaagcccgtggctagtggaattggtatcgaacatgcccaccattcatc 751
||||||| ||||| ||||| |||||||| ||| ||||| | |||||||| || |||| |
Sbjct: 1127 atgtgaagcgtgttagcccatggctagttgaactggtagcaaacatgccagccgttcacc 1186
Query: 752 tatctcccttctcaccgccaaggaagaagttgagactgccacaa 795
| || |||||||| || || ||||| || |||||| | ||||||
Sbjct: 1187 tttcgcccttctcgcctcctaggaaaaaattgagaattccacaa 1230
Score = 125 bits (63), Expect = 7e-28
Identities = 141/167 (84%)
Strand = Plus / Plus
Query: 19 attcttgctaaagatgttcatggagaaacatggaaatttaggcatatttatagaggaaca 78
|||||||| |||||||| ||||| || || ||||| |||||||||||||||||||| ||
Sbjct: 502 attcttgccaaagatgtgcatggtgagacttggaagtttaggcatatttatagagggact 561
Query: 79 ccaagaagacatcttttaacaactgggtggagtacttttgtcaatcataagaaattagta 138
|| ||| ||||||| || || ||||||||||||| |||||| || || ||||| | |||
Sbjct: 562 cctagacgacatctgttgactactgggtggagtaattttgtgaaccagaagaagcttgta 621
Query: 139 gcaggagattcaatagtgtttttgagagcagataatggtgatctttg 185
|| ||||| ||||| ||||||||||| || |||||||| ||||||||
Sbjct: 622 gctggagactcaattgtgtttttgagggcggataatggggatctttg 668
Score = 61.9 bits (31), Expect = 9e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 905 gcatgcagggagccaggcatgctcattatggtctatctttatcagatctccaccttaata 964
|||| |||||||||||||||||||| | ||| ||||||| | ||||||||||| | || |
Sbjct: 1337 gcatacagggagccaggcatgctcaatttggactatcttcagcagatctccacatcaaca 1396
Query: 965 aactgca 971
|||||||
Sbjct: 1397 aactgca 1403
>29848.m004631 phopholipase d alpha, putative
Length = 2454
Score = 89.7 bits (45), Expect = 4e-17
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 1193 attgcagcttgacgtgaatcttggagccaatgggattgtgtagttcatccaatatctcga 1252
|||||||||| || ||||||||||| || || ||||| | | ||||| | |||||| |
Sbjct: 466 attgcagcttaacatgaatcttggaaccgattggattacgctgctcatctagtatctcta 407
Query: 1253 cccatcggtcgatgatataccctttgatgacatcctcaactgggatataagctctgccaa 1312
||||||||||||| ||||||||| |||||||||| ||||| || ||||||||||| ||||
Sbjct: 406 cccatcggtcgattatataccctgtgatgacatcttcaacaggaatataagctcttccaa 347
Query: 1313 t 1313
|
Sbjct: 346 t 346
>29908.m005953 Auxin response factor, putative
Length = 1812
Score = 58.0 bits (29), Expect = 1e-07
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 55 tttaggcatatttatagaggaacaccaagaagacatcttttaacaactgggtggagtact 114
|||||||||||||||||||| || ||| | |||||| | ||||| ||||| ||||| |
Sbjct: 544 tttaggcatatttatagagggacgccacggagacatttgttaactactggatggagcaag 603
Query: 115 tttgtcaatcataagaa 131
|||||||| ||||||||
Sbjct: 604 tttgtcaaccataagaa 620
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 897 tcctgctggcatgcagggagccaggca 923
|||||||||||||||||||||||||||
Sbjct: 1338 tcctgctggcatgcagggagccaggca 1364