Jatropha Genome Database
- JcCB0182811.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0182811.10 - phase: 0 /partial
(1395 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29732.m000322 long-chain-fatty-acid CoA ligase, putative 565 e-160
>29732.m000322 long-chain-fatty-acid CoA ligase, putative
Length = 2193
Score = 565 bits (285), Expect = e-160
Identities = 525/605 (86%)
Strand = Plus / Plus
Query: 784 tggacggtttcatctttttctaaagttgagaaactgggcaaagacaatcccctccctcca 843
||||| |||||||||||| || ||||||||||| |||||||| |||||| || | |||
Sbjct: 775 tggacagtttcatcttttcctgaagttgagaaaatgggcaaaaccaatcctcttcttcct 834
Query: 844 agcatgccttccaaaaatggagttgctgttatcatgtatacaagtggcagcacaggccta 903
|| | |||||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct: 835 agtttaccttccaaggacgggattgctgttatcatgtatacaagtggcagcacaggcctg 894
Query: 904 ccaaagggagtcatgattactcatggcaacattatagccactgctgcagctgtcatgaca 963
|||||||| || ||||||||||||||||||||||| ||||| ||||||||| |||||
Sbjct: 895 ccaaagggggttatgattactcatggcaacattatcgccaccattgcagctgttatgact 954
Query: 964 gtgatcccaaaattgggtaccaatgatgtttatatggcatacttgcccctagcacatgtt 1023
||| ||||| || ||||| |||||||||||| |||| ||||||||| |||||||||||
Sbjct: 955 acgattccaaagttaggtactaatgatgtttatttggcgtacttgcccttagcacatgtt 1014
Query: 1024 cttgaactggctgctgagtctataatgttaactgcagggtgtgcaattggctatggttct 1083
|| ||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 1015 ctcgaattggctgccgagtctgtaatgttaactgcaggttgtgcaattggctatggttct 1074
Query: 1084 gcattgactttaacagacacatctaataaaattaagaaaggaaccaaaggtgatgctact 1143
|||||||||||||| ||||| |||||||||| ||||||||||||||||| |||||| ||
Sbjct: 1075 gcattgactttaactgacacggctaataaaatcaagaaaggaaccaaaggagatgcttct 1134
Query: 1144 gtgttaaagcccactctcatggctgcagttccagcgatactagatcgtgttagagatgga 1203
|| ||||||| ||||||||||| ||||||||| | |||||||||||||| | || |||
Sbjct: 1135 atgctaaagccaactctcatggcagcagttccaactatactagatcgtgtccgggaagga 1194
Query: 1204 gttctgaaaaaggttgaggagaaaggagggcttgcaaaaaagcttttcaaccttgcttat 1263
|||| |||||||||||| |||||||||||||| ||||| ||||||||| || ||| |||
Sbjct: 1195 gttcagaaaaaggttgatgagaaaggagggctagcaaagaagcttttcgacattggatat 1254
Query: 1264 aagcgacgattggcagccatagaaggaagctggtttggtgcttggggactggaaagaatg 1323
||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 1255 aagcggcgacaggcagccatagaaggaagctggtttggtgcttggggactggagagagtt 1314
Query: 1324 atgtgggatgttattgtcttcaaatcaatacgtgctgtacttggaggaaatatcagattt 1383
| ||||||| ||||||||||| | |||||||||||| ||||||||| ||||| |||||
Sbjct: 1315 ttatgggatgctattgtcttcagaacaatacgtgctggacttggagggcatatccgattt 1374
Query: 1384 atgct 1388
|||||
Sbjct: 1375 atgct 1379
Score = 553 bits (279), Expect = e-156
Identities = 598/704 (84%), Gaps = 9/704 (1%)
Strand = Plus / Plus
Query: 49 ttagggcctagtgattacttgtcaataggaaaaggttatggaacatatggcattttgggt 108
|||||| |||||||| | ||||| ||| ||||| |||||||| ||||| ||| |||||
Sbjct: 49 ttagggtctagtgatcagttgtctgtagagaaaggatatggaacctatggaattctgggt 108
Query: 109 gctgctgttgtggccattcttttacctgtattcctctccattgtgttcatggggaagaaa 168
|||||| |||| ||||| ||||||||||| | ||||||||||||||| |||| | ||||
Sbjct: 109 gctgctattgttgccatctttttacctgtactgctctccattgtgttcctgggaaggaaa 168
Query: 169 aaagtgaggcag---agaggagttcctgttgaagttggtggtgagccgggttatgcagtt 225
|| |||| || ||||||||||| || ||||||||||||||| | ||||||||| ||
Sbjct: 169 aaggtgaaaaaggtgagaggagttccggtggaagttggtggtgaggcaggttatgcaatt 228
Query: 226 cgcaatggtcgaacaagtcacttgatcgaagtcccttgggaaggggcaaataccatggct 285
|| |||| |||||| | |||||| ||||| |||||||||||||||| |||||||||
Sbjct: 229 cgaaatgctcgaactcctggcttgattgaagttccttgggaaggggcaactaccatggca 288
Query: 286 gctctgtttgagcaatcttgcaaaaagcattctaaacatagatttcttggaacaaggaag 345
||| |||||||||||||||| ||||| ||||| || || ||||||||||||||||||||
Sbjct: 289 gctttgtttgagcaatcttgtaaaaaacattcgcaatatcgatttcttggaacaaggaag 348
Query: 346 ttaattagcaaggaatttgtcccagctaaggatggt------aggaagtttgagaagcta 399
|| |||||| ||||||| || |||||| |||||| |||||||||||||||||
Sbjct: 349 ctagttagcagggaatttatcacagctagtgatggtagtggtaggaagtttgagaagctg 408
Query: 400 catttaggggattatgaatggcaaacctatggacaagtttttgagcgtgcatgcaacttc 459
||||| ||||| || ||||||||||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 409 catttgggggactacgaatggcaaacttatggacaagtttttgatcgtgcttgcaatttt 468
Query: 460 gcttccgggcttattggattaggccacaatgaggatactcgtgctgcaattttttctgaa 519
||||| ||||||||| |||||| || ||||||||| ||||||||||||| |||||||||
Sbjct: 469 gcttctgggcttattagattagagcataatgaggatgctcgtgctgcaatattttctgaa 528
Query: 520 actcgggctgaatggttcattgccttccagggatgcatgcggcagaatattactattgtt 579
||||| | || ||| |||||||||| ||||||||||||||||||||||||| | |||||
Sbjct: 529 actcgagaagagtggctcattgccttgcagggatgcatgcggcagaatattagtgttgtt 588
Query: 580 actatatatgcttctcttggcgaggatgcccttattcactcactcaatgagacacaagta 639
||||| ||| |||||||||| || ||||||||| | || |||||||||||||| |||||
Sbjct: 589 actatttattcttctcttggtgatgatgcccttgtccattcactcaatgagactgaagta 648
Query: 640 tcaactctgatttgtgattccaagcaattgaaaaagttggctccaataagctcaagacta 699
||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 649 caaaccttgatttgtgattccaagcaattgaaaaagttggctgctataagctcaagactg 708
Query: 700 acaactatcaataatgtgatttactttgaagatgatgaaagtgc 743
||||||||||| ||||||||||||||||||||||| | ||||||
Sbjct: 709 acaactatcaagaatgtgatttactttgaagatgagggaagtgc 752