Jatropha Genome Database
- JcCB0181351.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0181351.10 - phase: 2 /partial
(481 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29780.m001322 brg-1 associated factor, putative 266 1e-70
>29780.m001322 brg-1 associated factor, putative
Length = 1845
Score = 266 bits (134), Expect = 1e-70
Identities = 254/294 (86%)
Strand = Plus / Plus
Query: 172 gaaaggaaggtcgattaagggggataaagatggtaagaaaagaggcggcggcttcactaa 231
|||||||||| | | ||||| | |||| |||| |||||||||||| ||||||||||| ||
Sbjct: 747 gaaaggaagggctactaaggtgaataaggatgttaagaaaagaggaggcggcttcacgaa 806
Query: 232 attgtgtagcctttctccacaattacaagagttcattggagagtctgaattggccagaac 291
|||||||||||||||||||||| | |||||||||||||||||||| ||| |||||||||
Sbjct: 807 attgtgtagcctttctccacaacttcaagagttcattggagagtcaaaatcggccagaac 866
Query: 292 agaggttgtgaagaggctttgggcctatattcgggagagaaatttacaagatccaaagaa 351
|||||||||||| | |||||||| |||||| ||||||| || |||||||||||||||||
Sbjct: 867 agaggttgtgaaaaagctttgggtctatatccgggagaacaacttacaagatccaaagaa 926
Query: 352 taagcagaacataatatgcgatgaatcgttgcatgctcttttccatgttaattctatcaa 411
|| | || ||| |||| || ||||| |||| |||||||| | |||| |||| || ||
Sbjct: 927 tagacggattatattatgtgacgaatcattgcgagctctttttcgtgttgattccattaa 986
Query: 412 tatgtttcaaatgaataaagcattgtccaagcacatatggccactaaatgagga 465
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 987 tatgtttcaaatgaataaagttttgtccaagcacatatggccattaaatgagga 1040
Score = 236 bits (119), Expect = 1e-61
Identities = 239/279 (85%)
Strand = Plus / Plus
Query: 187 taagggggataaagatggtaagaaaagaggcggcggcttcactaaattgtgtagcctttc 246
||||| ||||||||||| ||||||||||| || ||||||||||||||||| || |||||
Sbjct: 1209 taaggtggataaagatgtaaagaaaagaggaggtggcttcactaaattgtgcagtctttc 1268
Query: 247 tccacaattacaagagttcattggagagtctgaattggccagaacagaggttgtgaagag 306
||||||| | |||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1269 tccacaacttcaagagttcactggagagtctgaattagccagaacagaggttgtgaagaa 1328
Query: 307 gctttgggcctatattcgggagagaaatttacaagatccaaagaataagcagaacataat 366
||||||| |||||| |||||| ||||||||||||||||||||||| ||| ||| |
Sbjct: 1329 gctttggatctatatcagggagaacaatttacaagatccaaagaataaaaggaatatatt 1388
Query: 367 atgcgatgaatcgttgcatgctcttttccatgttaattctatcaatatgtttcaaatgaa 426
||| |||||||| |||| | ||||| | ||| ||| ||| |||||||||||||||||
Sbjct: 1389 atgtgatgaatcattgcgcacactttttcgggttgattgtattaatatgtttcaaatgaa 1448
Query: 427 taaagcattgtccaagcacatatggccactaaatgagga 465
||| | ||||||||||||||||||||| || |||||||
Sbjct: 1449 taaggtgttgtccaagcacatatggccattagatgagga 1487
Score = 95.6 bits (48), Expect = 2e-19
Identities = 147/180 (81%)
Strand = Plus / Plus
Query: 275 tctgaattggccagaacagaggttgtgaagaggctttgggcctatattcgggagagaaat 334
|||||||| || ||||| ||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 406 tctgaattagctagaactgaggttgtgaagaaactttgggcctatatccgggagaatgat 465
Query: 335 ttacaagatccaaagaataagcagaacataatatgcgatgaatcgttgcatgctcttttc 394
|| || || |||||||||| || || |||| ||| |||||| | |||| || ||||||
Sbjct: 466 ttgcaggacccaaagaataggcggattataaaatgtgatgaagcattgcgtgatcttttt 525
Query: 395 catgttaattctatcaatatgtttcaaatgaataaagcattgtccaagcacatatggcca 454
| ||| ||||| || |||||||||||||||||||| || | |||||||| || ||||||
Sbjct: 526 cgtgtaaattcgattaatatgtttcaaatgaataaggccctctccaagcatatttggcca 585