Jatropha Genome Database
- JcCB0176301.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0176301.20 + phase: 0
(411 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29805.m001490 ccaat-binding transcription factor subunit A, puta... 345 1e-94
29923.m000817 ccaat-binding transcription factor subunit A, puta... 161 4e-39
29966.m000228 ccaat-binding transcription factor subunit A, puta... 82 3e-15
29719.m000316 ccaat-binding transcription factor subunit A, puta... 72 3e-12
29629.m001382 ccaat-binding transcription factor subunit A, puta... 66 2e-10
>29805.m001490 ccaat-binding transcription factor subunit A,
putative
Length = 543
Score = 345 bits (174), Expect = 1e-94
Identities = 273/306 (89%)
Strand = Plus / Plus
Query: 52 ggcgaacacagcccccgctctaactctaattttcgtgaacaagataggtacctgcccatc 111
||||| || ||||| ||||| ||||| ||| |||| |||||||||||||| || || |||
Sbjct: 64 ggcgaccaaagccctcgctccaactcaaatgttcgcgaacaagataggtatctcccgatc 123
Query: 112 gccaatattagccggatcatgaagaaggctcttcctgcaaatggtaagatcgctaaggat 171
|| |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 124 gctaatattagtcgcatcatgaagaaagctcttcctgctaatggtaagatcgctaaggat 183
Query: 172 gctaaggaaactgttcaggaatgcgtctctgagtttatcagtttcatcaccagcgaggcg 231
|| |||||||||||||||||||| || |||||||| ||||| |||||||||||||| |||
Sbjct: 184 gccaaggaaactgttcaggaatgtgtttctgagttcatcagcttcatcaccagcgaagcg 243
Query: 232 agtgataagtgtcagagagagaagaggaagacaatcaatggtgatgatttgctatgggct 291
||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||||||
Sbjct: 244 agtgataagtgccagagagagaagaggaaaacaattaatggtgacgatttactatgggcc 303
Query: 292 atggcgacgttaggttttgaggattatatcgatccgcttaagatttacttgtctcgatac 351
||||| || |||||||||||||||||||| ||||| ||||||||||||||| |||| |||
Sbjct: 304 atggctacattaggttttgaggattatattgatcctcttaagatttacttgactcgttac 363
Query: 352 agagag 357
||||||
Sbjct: 364 agagag 369
>29923.m000817 ccaat-binding transcription factor subunit A,
putative
Length = 525
Score = 161 bits (81), Expect = 4e-39
Identities = 177/209 (84%)
Strand = Plus / Plus
Query: 125 ggatcatgaagaaggctcttcctgcaaatggtaagatcgctaaggatgctaaggaaactg 184
||||||||||||| ||| | ||||| ||||| || |||||||| ||||| ||||| ||||
Sbjct: 116 ggatcatgaagaaagctttgcctgccaatggaaaaatcgctaaagatgcaaaggatactg 175
Query: 185 ttcaggaatgcgtctctgagtttatcagtttcatcaccagcgaggcgagtgataagtgtc 244
| || ||||| ||||| |||||||| || || || || |||||||| |||||||||||||
Sbjct: 176 tccaagaatgtgtctcggagtttattagctttattacgagcgaggcaagtgataagtgtc 235
Query: 245 agagagagaagaggaagacaatcaatggtgatgatttgctatgggctatggcgacgttag 304
||| ||||| ||||||||||||||||| ||||||||| | ||||| ||||| || ||||
Sbjct: 236 agaaggagaaaaggaagacaatcaatggggatgatttgttgtgggcaatggccacattag 295
Query: 305 gttttgaggattatatcgatccgcttaag 333
| |||||||| ||||| || |||||||||
Sbjct: 296 gctttgaggactatattgaaccgcttaag 324
>29966.m000228 ccaat-binding transcription factor subunit A,
putative
Length = 594
Score = 81.8 bits (41), Expect = 3e-15
Identities = 131/161 (81%)
Strand = Plus / Plus
Query: 119 ttagccggatcatgaagaaggctcttcctgcaaatggtaagatcgctaaggatgctaagg 178
||||| ||||||||||||| ||| | || || |||| ||||| | ||||||||||| |
Sbjct: 104 ttagcaggatcatgaagaaagctttaccagctaatgcaaagatttcaaaggatgctaaag 163
Query: 179 aaactgttcaggaatgcgtctctgagtttatcagtttcatcaccagcgaggcgagtgata 238
| || |||||||| || || || ||||| || |||||||||||| | || || |||||
Sbjct: 164 agacagttcaggagtgtgtgtcagagttcataagtttcatcaccggagaagcctctgata 223
Query: 239 agtgtcagagagagaagaggaagacaatcaatggtgatgat 279
||||||| || |||||||||||||| ||||| |||||||||
Sbjct: 224 agtgtcaaagggagaagaggaagacgatcaacggtgatgat 264
>29719.m000316 ccaat-binding transcription factor subunit A,
putative
Length = 663
Score = 71.9 bits (36), Expect = 3e-12
Identities = 135/168 (80%)
Strand = Plus / Plus
Query: 127 atcatgaagaaggctcttcctgcaaatggtaagatcgctaaggatgctaaggaaactgtt 186
||||||||||| |||| |||||||||| || || | || || ||||| |||||||||
Sbjct: 106 atcatgaagaaatctctccctgcaaatgcaaaaatatccaaagaagctaaagaaactgtt 165
Query: 187 caggaatgcgtctctgagtttatcagtttcatcaccagcgaggcgagtgataagtgtcag 246
|| |||||||| || ||||| || || || |||||| |||| || |||||||||||
Sbjct: 166 caagaatgcgtttccgagttcataagctttatcaccggcgaagcctccgataagtgtcaa 225
Query: 247 agagagaagaggaagacaatcaatggtgatgatttgctatgggctatg 294
||||||||||||||||| || || || |||||| | |||||||||||
Sbjct: 226 agagagaagaggaagaccataaacggcgatgatcttttatgggctatg 273
>29629.m001382 ccaat-binding transcription factor subunit A,
putative
Length = 543
Score = 65.9 bits (33), Expect = 2e-10
Identities = 129/161 (80%)
Strand = Plus / Plus
Query: 119 ttagccggatcatgaagaaggctcttcctgcaaatggtaagatcgctaaggatgctaagg 178
||||| |||| ||||| || || ||||| ||||| | ||| ||| | || |||||||| |
Sbjct: 113 ttagcaggataatgaaaaaagcgcttccagcaaacgctaaaatctccaaagatgctaaag 172
Query: 179 aaactgttcaggaatgcgtctctgagtttatcagtttcatcaccagcgaggcgagtgata 238
|||| ||||| |||||||| |||||||| || || || |||| | || || |||||
Sbjct: 173 aaacagttcaagaatgcgtgtctgagttcataagctttgtcacaggagaagcctctgata 232
Query: 239 agtgtcagagagagaagaggaagacaatcaatggtgatgat 279
|||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 233 agtgccagagagagaagagaaagaccatcaatggcgatgat 273