Jatropha Genome Database

JcCB0176301.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0176301.10 + phase: 0 /pseudo/partial
         (369 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29805.m001491 Nodulation receptor kinase precursor, putative          301   2e-81

>29805.m001491 Nodulation receptor kinase precursor, putative
          Length = 2703

 Score =  301 bits (152), Expect = 2e-81
 Identities = 267/303 (88%), Gaps = 3/303 (0%)
 Strand = Plus / Plus

                                                                        
Query: 36   ggcaaagttacacattgagagtggtgatatccaaggaattattgatccttcgct--acgc 93
            ||||||||||||||| |||||||| ||||| |||||| |||||||| | ||  |  | | 
Sbjct: 2364 ggcaaagttacacatagagagtggggatattcaaggagttattgattcgtcattcgatga 2423

                                                                        
Query: 94   -gatgagtatgatatacaatcaatgtggaagatagcagagaaagctttaatgtgcgtcca 152
             ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2424 tgatgagtatgatatacaatcaatgtggaagatagcagagaaagctttgatgtgcgtcca 2483

                                                                        
Query: 153  gcctcacggtcacatgaggccatcaatttcagaagtccttaaggagattcaagatgctat 212
            ||| ||||| |||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 2484 gccgcacggacacatgaggccatcaatttcagaagttctgaaggagatccaagatgctat 2543

                                                                        
Query: 213  tttaattgaaaaggaatctatgacagtgagagaaggtaactccgatgacttgtcgaggac 272
            |  |||||||| ||| ||| || ||||||||||||||||||| |||||| |||| |||| 
Sbjct: 2544 tgcaattgaaagggagtctgtggcagtgagagaaggtaactcggatgacatgtcaaggaa 2603

                                                                        
Query: 273  ttctgcccattcttcactgaacttgggttctttggaatttggtggaactgagaattactt 332
            |||||  |||||||| || ||||||||||| |||||||| |||||||||||||||||| |
Sbjct: 2604 ttctgttcattcttccctcaacttgggttccttggaattgggtggaactgagaattacct 2663

               
Query: 333  atc 335
            |||
Sbjct: 2664 atc 2666