Jatropha Genome Database
- JcCB0175951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0175951.10 + phase: 1 /partial
(1544 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29682.m000571 hmg-CoA reductase, putative 1005 0.0
30170.m013805 hmg-CoA reductase, putative 351 8e-96
30162.m001288 hmg-CoA reductase, putative 276 4e-73
>29682.m000571 hmg-CoA reductase, putative
Length = 1731
Score = 1005 bits (507), Expect = 0.0
Identities = 1067/1253 (85%), Gaps = 3/1253 (0%)
Strand = Plus / Plus
Query: 291 tctgatgatgacgaacagattatcaattcagtagtttctggttctattccttcttattct 350
|||||||||||||| ||||||||||||||| | ||||| || |||||||||| ||
Sbjct: 478 tctgatgatgacga---gattatcaattcagttctctctggctcccttccttcttactcc 534
Query: 351 ctcgaatccaaacttggagattgtagaagagccgcggctatccgccgtgagtcgctgcag 410
|| ||||| || |||||||| || | ||| || || ||||| ||||| ||| | || |||
Sbjct: 535 cttgaatcaaagcttggagactgcaaaagggctgctgctattcgccgcgaggctcttcag 594
Query: 411 aggatgactggaaggtctttggaaggattgcctttagatggtttcgattatgagtccata 470
|||||||| || ||||| ||||||| ||||| || ||||| || ||||| |||||||||
Sbjct: 595 aggatgacgggtaggtcgctggaaggtttgcccttggatgggtttgattacgagtccata 654
Query: 471 ctagggcagtgttgtgagatgccaattggatatgtgcagattccggtgggcattgctggg 530
| || ||||| ||||||||||||||||| || || |||||||| || || |||||||||
Sbjct: 655 ttgggtcagtgctgtgagatgccaattgggtacgtccagattcctgttgggattgctggg 714
Query: 531 ccattgttgttggatggaattgaatatacggtaccaatggcgacgacggagggctgtttg 590
||||||||||||||||||| |||||| || || |||||||| || ||||| || || |
Sbjct: 715 ccattgttgttggatggaaatgaatacactgtgccaatggcaactacggaaggttgcctt 774
Query: 591 gttgctagtacgaatagaggatgtaaggctatttatgtatcaggtggcgccacctctact 650
|| || || || ||||||||||| |||||||||||||| || || || || || ||||||
Sbjct: 775 gtggcaagcaccaatagaggatgcaaggctatttatgtttctggaggggctacttctact 834
Query: 651 ttgtttagagatggaatgaccagagctcctgttgttaggtttcctacagccaagagagcc 710
||||| || ||||| |||||||| ||||||||||| ||||||| || || | |||||
Sbjct: 835 ttgttgagggatggcatgaccagggctcctgttgtcaggtttcaaactgctcaaagagct 894
Query: 711 tctgacttgaagtttttcattgaagatcctaccagtttcgacacaatcgccgttgttttt 770
|||| ||||||| ||||| || ||||||| || ||| ||||| || ||| |||||||
Sbjct: 895 gctgagctgaagttcttcatggaggatcctaacaattttgacaccattgcccttgttttc 954
Query: 771 aacaaatcaagcagatttgcaaagctacaaggcgtcaaatgtgcaatagcaggaaaaaat 830
||||| ||||||||||||| || ||| ||| ||||| ||||||| |||||||||||||||
Sbjct: 955 aacaagtcaagcagatttggaaggctccaaagcgtccaatgtgctatagcaggaaaaaat 1014
Query: 831 ctgtacatgaggtttaactgcaacacaggtgatgctatgggaatgaacatggtgtctaaa 890
|| ||||||||||||| |||| |||||||||||| ||||| ||||||||||| || |||
Sbjct: 1015 ctttacatgaggtttaggtgcagcacaggtgatgccatggggatgaacatggtctccaaa 1074
Query: 891 ggagtccagaacgtcctcgattaccttcgagacgatttccctgacatggatgtcattggc 950
|||||||| || ||||| ||||| |||| | | || ||||||||||||||||| || |||
Sbjct: 1075 ggagtccaaaatgtcctggattatcttcaaaatgaattccctgacatggatgttatcggc 1134
Query: 951 atctctggtaatttttgttcggataagaagccagcagcagttaactggatagaggggcgt 1010
|||||||| || || |||||||| |||||| ||||||| || ||||||||||| || |||
Sbjct: 1135 atctctgggaacttctgttcggacaagaaggcagcagctgtaaactggatagaaggacgt 1194
Query: 1011 ggaaagtctgtagtatgtgaggcaatcataaaggaagaagtggtaagaaaggtgttgaaa 1070
||||| |||||||| ||||| || ||| |||| ||||| ||||| | ||||| |||||
Sbjct: 1195 ggaaaatctgtagtttgtgaagccatcgtaaaagaagaggtggttaagaaggttctgaaa 1254
Query: 1071 accaacgtggctgctttggtggagcttaacatgcttaaaaaccttaccggctcagccgtg 1130
||||| || ||||| ||||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 1255 accaatgtagctgccctggtggagcttaatgtgcttaaaaacctcactggctcagccgtg 1314
Query: 1131 gctggtgctcttggcgggtttaatgcccatgccagcaatattgtaactgcagtgtatata 1190
|| ||||||||||| ||||| ||||||||||| |||||||||||||||||||| || |
Sbjct: 1315 gcaggtgctcttggtgggttcaatgcccatgctagcaatattgtaactgcagtctacttg 1374
Query: 1191 gccacaggacaggatcccgcccaaaatgtggagagttctcactgtattaccatgatggaa 1250
||||| ||||||||||| || |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 1375 gccactggacaggatcctgctcaaaatgtagagagttctcactgtatcaccatgatggaa 1434
Query: 1251 gctgttaatgatggcaaagaccttcacatctcagtcaccatgccttccattgaggtgggt 1310
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1435 gctgttaatgatggcaaggaccttcacatctcagtcacgatgccttccattgaggtgggt 1494
Query: 1311 acagtaggaggtggcactcaactggcatcgcaatcagcttgcctgaacctacttggggtg 1370
||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 1495 acagttggaggtggcactcaactggcatctcaatcagcttgcctgaatctacttggagtg 1554
Query: 1371 aaaggtgcaagcaaagagttaccagggtcaaattcaaggcttctggctagtattgtggct 1430
| ||||| |||||||| | ||||| ||||| |||||||||||||||| |||||||||
Sbjct: 1555 aggggtgctagcaaagattctccaggatcaaactcaaggcttctggctaccattgtggct 1614
Query: 1431 ggttctgttcttgcaggggaactgtctctcatgtctgctcttgcagctggacaactggtt 1490
|||||||| || |||||||| ||||| || ||||| |||||||||||||||||||| |||
Sbjct: 1615 ggttctgtcctggcaggggagctgtcccttatgtcggctcttgcagctggacaacttgtt 1674
Query: 1491 aagagccacatgagatacaacagatctagcaaagatgtgcccaaaatagcttc 1543
| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||
Sbjct: 1675 aggagccacatgaaatacaacagatctagcaaagatgtgtccaaaacagcttc 1727
Score = 133 bits (67), Expect = 3e-30
Identities = 121/139 (87%)
Strand = Plus / Plus
Query: 19 gatggcgggaaaagatccgtaactctactcctcttcacattgttaatttccctgagatag 78
|||||||||||||||||||||| || |||||||| || || ||| |||||||| ||||
Sbjct: 176 gatggcgggaaaagatccgtaattcgactcctctccatatacttaccttccctgaaatag 235
Query: 79 ccgctttggtttgtttagtcgcttctgtaatctatcttctcggtttctttggcattggct 138
| || ||| |||| || || |||||||| ||||||||||| |||||||||||||||||||
Sbjct: 236 cagccttgttttgcttggttgcttctgttatctatcttcttggtttctttggcattggct 295
Query: 139 ttgttcattctttcacttc 157
||||||| |||||||||||
Sbjct: 296 ttgttcagtctttcacttc 314
>30170.m013805 hmg-CoA reductase, putative
Length = 1731
Score = 351 bits (177), Expect = 8e-96
Identities = 621/769 (80%)
Strand = Plus / Plus
Query: 760 ccgttgtttttaacaaatcaagcagatttgcaaagctacaaggcgtcaaatgtgcaatag 819
||||||||||||||| || || |||||||| ||||| |||| | | |||| ||||| |
Sbjct: 944 ccgttgtttttaacaggtcgagtagatttgcgaagcttcaagccattcaatgcgcaattg 1003
Query: 820 caggaaaaaatctgtacatgaggtttaactgcaacacaggtgatgctatgggaatgaaca 879
| || || ||||| || ||||| || | ||||| ||| || || || ||||| |||||||
Sbjct: 1004 cgggtaagaatctatatatgagattcagctgcagcactggcgacgcaatggggatgaaca 1063
Query: 880 tggtgtctaaaggagtccagaacgtcctcgattaccttcgagacgatttccctgacatgg 939
|||| || ||||| || || ||||| || |||| |||| | | |||||||| || ||||
Sbjct: 1064 tggtttccaaaggggttcaaaacgttcttgattttcttcaaaatgatttccccgatatgg 1123
Query: 940 atgtcattggcatctctggtaatttttgttcggataagaagccagcagcagttaactgga 999
|||| ||||||||||| || |||||||||||||| ||||| || || || || |||||||
Sbjct: 1124 atgttattggcatctcagggaatttttgttcggacaagaaacctgccgctgtaaactgga 1183
Query: 1000 tagaggggcgtggaaagtctgtagtatgtgaggcaatcataaaggaagaagtggtaagaa 1059
| || || ||||| || || || || ||||||||||| || |||||||| ||||| | ||
Sbjct: 1184 ttgaaggacgtggcaaatcagttgtttgtgaggcaattatcaaggaagaggtggtgaaaa 1243
Query: 1060 aggtgttgaaaaccaacgtggctgctttggtggagcttaacatgcttaaaaaccttaccg 1119
|||||||||||||||| || ||| || |||||||||| ||| |||| || || ||||| |
Sbjct: 1244 aggtgttgaaaaccaatgttgcttctctggtggagctcaacgtgctcaagaatcttactg 1303
Query: 1120 gctcagccgtggctggtgctcttggcgggtttaatgcccatgccagcaatattgtaactg 1179
| || || || ||||||||| | || || ||||| |||||||| ||| ||||| |||
Sbjct: 1304 gttctgctgttgctggtgctttgggtggatttaacgcccatgcagccaacattgtctctg 1363
Query: 1180 cagtgtatatagccacaggacaggatcccgcccaaaatgtggagagttctcactgtatta 1239
|| | | ||| || || || |||||||| || || ||||| |||||||||||||| || |
Sbjct: 1364 caatttttattgcaactggccaggatccagcacagaatgtcgagagttctcactgcatca 1423
Query: 1240 ccatgatggaagctgttaatgatggcaaagaccttcacatctcagtcaccatgccttcca 1299
|||||||||||||||| |||||||| || || |||||| |||| ||||||||||||||||
Sbjct: 1424 ccatgatggaagctgtgaatgatggaaaggatcttcacgtctctgtcaccatgccttcca 1483
Query: 1300 ttgaggtgggtacagtaggaggtggcactcaactggcatcgcaatcagcttgcctgaacc 1359
|||||||||||||||| |||||||| |||||||| ||||| || || |||||||| ||
Sbjct: 1484 ttgaggtgggtacagttggaggtggaactcaactagcatctcagtctgcttgcctcaatt 1543
Query: 1360 tacttggggtgaaaggtgcaagcaaagagttaccagggtcaaattcaaggcttctggcta 1419
||||||| ||||| |||||||| ||||||| |||||||||||| || ||||| || || |
Sbjct: 1544 tacttggtgtgaagggtgcaagtaaagagtcaccagggtcaaactcgaggctccttgcca 1603
Query: 1420 gtattgtggctggttctgttcttgcaggggaactgtctctcatgtctgctcttgcagctg 1479
|| || |||||||| ||| | || || || ||||| || |||||||| |||||||||
Sbjct: 1604 ccatagtagctggttcagttttggccggtgagctgtccctgatgtctgccattgcagctg 1663
Query: 1480 gacaactggttaagagccacatgagatacaacagatctagcaaagatgt 1528
| || || || ||||| ||||||| ||||| ||||| |||| ||||||
Sbjct: 1664 ggcagcttgtcaagagtcacatgaagtacaatagatccagcagagatgt 1712
>30162.m001288 hmg-CoA reductase, putative
Length = 1761
Score = 276 bits (139), Expect = 4e-73
Identities = 511/635 (80%)
Strand = Plus / Plus
Query: 849 tgcaacacaggtgatgctatgggaatgaacatggtgtctaaaggagtccagaacgtcctc 908
|||| ||| |||||||||||||| ||||| ||||| || ||||| |||||||| || ||
Sbjct: 1057 tgcagcactggtgatgctatgggcatgaatatggtatccaaaggtgtccagaatgtactg 1116
Query: 909 gattaccttcgagacgatttccctgacatggatgtcattggcatctctggtaatttttgt 968
|||| | | | | ||||||| ||||||||||| ||||||||||||||||| || |||
Sbjct: 1117 gatttcttacagaatcatttcccagacatggatgttattggcatctctggtaacttctgt 1176
Query: 969 tcggataagaagccagcagcagttaactggatagaggggcgtggaaagtctgtagtatgt 1028
|| |||||||||||||| || ||||||||||| || || | || || || ||||||||
Sbjct: 1177 tctgataagaagccagctgctgttaactggatcgaaggaaggggtaaatcagtagtatgc 1236
Query: 1029 gaggcaatcataaaggaagaagtggtaagaaaggtgttgaaaaccaacgtggctgctttg 1088
||||| ||||| |||| | |||| | ||||| ||||| || | ||| | || |||
Sbjct: 1237 gaggcgatcattaagggtaatatggtgaagaaggtattgaagacaagcgttgaggcattg 1296
Query: 1089 gtggagcttaacatgcttaaaaaccttaccggctcagccgtggctggtgctcttggcggg 1148
||||||||||||||||| || ||||| || || || ||| |||| || ||||| || |||
Sbjct: 1297 gtggagcttaacatgctcaagaacctcactggttctgccatggcaggagctctaggtggg 1356
Query: 1149 tttaatgcccatgccagcaatattgtaactgcagtgtatatagccacaggacaggatccc 1208
|| ||||| |||||||| |||||||| ||||| || || |||||||| || || |||||
Sbjct: 1357 ttcaatgctcatgccagtaatattgtcactgctgtctacatagccactggccaagatcct 1416
Query: 1209 gcccaaaatgtggagagttctcactgtattaccatgatggaagctgttaatgatggcaaa 1268
|| |||||||| ||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct: 1417 gcacaaaatgttgagagttctcactgtatcactatgatggaagctgttaatgatgggcag 1476
Query: 1269 gaccttcacatctcagtcaccatgccttccattgaggtgggtacagtaggaggtggcact 1328
|| ||||| |||| ||||| |||||||| |||||||| ||||| || ||||| || ||
Sbjct: 1477 gatcttcatgtctctgtcactatgccttctattgaggttggtactgttggaggaggtaca 1536
Query: 1329 caactggcatcgcaatcagcttgcctgaacctacttggggtgaaaggtgcaagcaaagag 1388
|| || || || || ||||| ||| ||||||| ||||||||||| ||||| |||||||||
Sbjct: 1537 cagcttgcctcacagtcagcatgcttgaacctgcttggggtgaagggtgccagcaaagag 1596
Query: 1389 ttaccagggtcaaattcaaggcttctggctagtattgtggctggttctgttcttgcaggg 1448
|||||| | || |||||||||||||| |||||| ||||| ||||| ||||| ||
Sbjct: 1597 acaccaggagctaactcaaggcttctggcctctattgttgctggctctgtccttgctgga 1656
Query: 1449 gaactgtctctcatgtctgctcttgcagctggaca 1483
|| || ||||| ||| | || ||||| ||||||||
Sbjct: 1657 gagctctctctaatggccgcacttgccgctggaca 1691