Jatropha Genome Database

JcCB0174221.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0174221.10 - phase: 0 
         (213 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29727.m000488 DNA binding protein, putative                            92   2e-18

>29727.m000488 DNA binding protein, putative
          Length = 4125

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 112/134 (83%)
 Strand = Plus / Plus

                                                                       
Query: 22  tcaaaaactggtactaggttccgtgcaaagcctgttattccaccagagcctgctctggat 81
           |||||||||||||||||||| ||| |||||||| ||| |  |||||||||||| || |||
Sbjct: 22  tcaaaaactggtactaggtttcgtccaaagcctattactttaccagagcctgcgcttgat 81

                                                                       
Query: 82  gaggtttcagggaattctaaggaaagctcagtgattggctcgaagaatgaatcttcttcg 141
           ||||  |||| |||  |||||||||||||  | |||||||| ||||||||||| ||   |
Sbjct: 82  gaggcctcagagaacactaaggaaagctctttaattggctcaaagaatgaatcctcaaag 141

                         
Query: 142 agaaagctccaggt 155
           ||||||||| ||||
Sbjct: 142 agaaagctcgaggt 155