Jatropha Genome Database

JcCB0174101.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0174101.10 - phase: 0 
         (396 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28725.m000310 RNA splicing protein mrs2, mitochondrial, putative      143   9e-34

>28725.m000310 RNA splicing protein mrs2, mitochondrial, putative
          Length = 1362

 Score =  143 bits (72), Expect = 9e-34
 Identities = 138/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 205 aagaaggctggaggggcgaggctgtggatgaggtttgataagtttgggaattcggagctg 264
           |||||||| || ||||||||  ||||||||||||||||||  || |||||||||||  ||
Sbjct: 193 aagaaggcagggggggcgagattgtggatgaggtttgatagattagggaattcggaattg 252

                                                                       
Query: 265 atggaatgtgataaaagcacaattattaagcgtgtggcgattccggctagggatttgagg 324
           |||||||||||||||||   |||||| ||||| ||| | || || |||||||||||||||
Sbjct: 253 atggaatgtgataaaagtgtaattataaagcgcgtgtctatccctgctagggatttgagg 312

                                                   
Query: 325 attcttggccctgtcttctctcattcctctaatattcttg 364
           |||||||| ||| | |||||||| ||||||||||||||||
Sbjct: 313 attcttggtcctcttttctctcactcctctaatattcttg 352