Jatropha Genome Database

JcCB0174071.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0174071.10 - phase: 0 /pseudo
         (475 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29794.m003436 catalytic, putative                                     369   e-101

>29794.m003436 catalytic, putative
          Length = 2952

 Score =  369 bits (186), Expect = e-101
 Identities = 312/354 (88%)
 Strand = Plus / Plus

                                                                       
Query: 61  accttgtcgctttacgaagatcaagtaggcctcatggactggcatcaacagtacataggg 120
           ||||| || ||||||||||||||||| || || ||||| |||||||| | ||||||||| 
Sbjct: 55  accttttctctttacgaagatcaagttggtcttatggattggcatcagcggtacatagga 114

                                                                       
Query: 121 aaagtgaaggacgcagtattccacacgcagaagactggtagaaaacgcgttgtcgtttcc 180
           ||||||||||| |||||||| ||||| ||||| ||||||||||| |||||| ||||||||
Sbjct: 115 aaagtgaaggatgcagtatttcacacacagaaaactggtagaaagcgcgttatcgtttcc 174

                                                                       
Query: 181 acagaagagaatgttatagcttcccttgatcttcgacacggcgagattttttggaggcac 240
           || |||||||| ||||| ||||| ||||||||||| || |||||||||||||||||||| 
Sbjct: 175 actgaagagaacgttatcgcttctcttgatcttcgccatggcgagattttttggaggcat 234

                                                                       
Query: 241 gttcttgggaccgatgatgttattgatgggattgatattgccttggggaaatatgtcatt 300
           ||  |||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||
Sbjct: 235 gtatttgggaccaatgatgctattgatggaattgatattgccatggggaaatatgtcatt 294

                                                                       
Query: 301 actctttcatcagagggaagtattttaagagcatggaacctacctgatggtcagatggtg 360
           || ||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||
Sbjct: 295 accctttcgtcagagggaggtattttaagagcatggaaccttcctgatggacagatggtg 354

                                                                 
Query: 361 tgggaatcttttcttcaaggcccaaatcactcgaagtcattgttgttggtgccg 414
           ||||||||||||||||| || |  |||| ||| |||||||| ||  ||||||||
Sbjct: 355 tgggaatcttttcttcagggtcttaatccctcaaagtcattattactggtgccg 408