Jatropha Genome Database

JcCB0173481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0173481.10 - phase: 1 /partial
         (485 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29839.m000431 diphosphomevalonate decarboxylase, putative             446   e-125

>29839.m000431 diphosphomevalonate decarboxylase, putative
          Length = 1248

 Score =  446 bits (225), Expect = e-125
 Identities = 363/410 (88%), Gaps = 1/410 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttggtggttttgtgaa-tggaacatgggcaaagttgaagatggaagtgacagtcgtgct 59
           |||||||| |||||||| |||| |||||| |||||||| || ||||||||||| |  |||
Sbjct: 502 tttggtggatttgtgaagtggatcatgggaaaagttgatgacggaagtgacagcctggct 561

                                                                       
Query: 60  gttcaagttgttgatgacaagcactgggatgatcttgttattattattgctgtggtaagt 119
           |||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 562 gttcaacttgtcgatgagaagcactgggatgatcttgttattatcattgctgtggtaagt 621

                                                                       
Query: 120 tcacggcagaaagaaacaagtagtaccacaggaatgcgtgagactgttgaaactagcctg 179
           ||||||||||||||||| ||||| ||| ||||||||||||| |  |||||||||||| ||
Sbjct: 622 tcacggcagaaagaaactagtagcacctcaggaatgcgtgaaagcgttgaaactagcttg 681

                                                                       
Query: 180 cttttgcaacacagagctaaggaggttgtaccaaaacgcattataaaaatggaagaggcc 239
           ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 682 cttttgcaacatagagctaaggaggttgtaccaaaacgcatcatacaaatggaagaggcc 741

                                                                       
Query: 240 ataaagaaccgtgattttgcatcttttgcacaattaacctgtgctgatagtaatcagttc 299
           ||||| || || ||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 742 ataaataagcgcgattttgcatcttttgcccaaataacctgtgctgatagtaatcagttc 801

                                                                       
Query: 300 cacgctgtctgcttagatacatnnnnnnntattttctacatgaatgatacatcccacagg 359
           || |||||||||||||| || |        ||||||||||||||||||||||||||||||
Sbjct: 802 catgctgtctgcttagacacgtgtcccccaattttctacatgaatgatacatcccacagg 861

                                                             
Query: 360 ataataagctgcattgagaaatggaattgctgtgagggaacacctcaggt 409
           ||||| |||||  |||||||||||||| | | ||| | ||||||||||||
Sbjct: 862 ataatcagctgtgttgagaaatggaatcgttctgaagaaacacctcaggt 911