Jatropha Genome Database

JcCB0172401.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0172401.10 - phase: 2 /pseudo/partial
         (500 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013921 methylcobalamin:com methyltransferase, putative         252   2e-66
39173.m000011 methylcobalamin:com methyltransferase, putative         147   7e-35

>30170.m013921 methylcobalamin:com methyltransferase, putative
          Length = 381

 Score =  252 bits (127), Expect = 2e-66
 Identities = 214/243 (88%)
 Strand = Plus / Plus

                                                                       
Query: 29  ggggttgtaggagctggtacggcgagcatttttaatgaagtaatgcaatcatcagggcaa 88
           |||||||| ||||||||||| || ||||||||||||||||||| |||| |||| || |||
Sbjct: 124 ggggttgttggagctggtacagcaagcatttttaatgaagtaaagcaaacatctggacaa 183

                                                                       
Query: 89  gttcttgatatttcctttacaccatctaaagctacaggtaaggttttggcatctgaactt 148
             |||||||||| |||||   |||||||||||||||||||||||||||||||| || |||
Sbjct: 184 tctcttgatattgcctttgtgccatctaaagctacaggtaaggttttggcatcagagctt 243

                                                                       
Query: 149 ccgaagagtgagaacaaaacatgtactgtgttgtatccagcttctgccaaagcaagtaat 208
           || |||||||||| ||||| ||| || |||||||||||||||||||| ||||||||||||
Sbjct: 244 ccaaagagtgagagcaaaagatgcaccgtgttgtatccagcttctgctaaagcaagtaat 303

                                                                       
Query: 209 gagattgaggaaggcctgtctaatcgtggatttgaggtagtaaggctaaacacatacaca 268
           || ||||||||||| || |||||||| ||||||||||| || |||||||| ||||| |||
Sbjct: 304 gaaattgaggaaggtctctctaatcgcggatttgaggttgtgaggctaaatacatataca 363

              
Query: 269 aca 271
           |||
Sbjct: 364 aca 366


>39173.m000011 methylcobalamin:com methyltransferase, putative
          Length = 237

 Score =  147 bits (74), Expect = 7e-35
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                       
Query: 319 ttgccctgttgttgctgtcgcttctccttctgcagttcgtgcctgggtcaaccttatttc 378
           ||||||||| ||||| || ||||||||||||||||||||||||||||||||  |||||||
Sbjct: 24  ttgccctgtggttgcggttgcttctccttctgcagttcgtgcctgggtcaattttatttc 83

                                                                       
Query: 379 agaatcagagcagtggaacaattcagtggcatgcattggtgagacaactgcttcagcggc 438
           |||||| ||||| |||||||||||| | || || ||||||||||||||||||||||| ||
Sbjct: 84  agaatccgagcaatggaacaattcaatcgcctgtattggtgagacaactgcttcagcagc 143

             
Query: 439 aa 440
           ||
Sbjct: 144 aa 145