Jatropha Genome Database
- JcCB0171941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0171941.10 - phase: 0 /pseudo
(814 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006452 DNA-damage-inducible protein f, putative 634 0.0
27810.m000635 DNA-damage-inducible protein f, putative 121 7e-27
29606.m000098 DNA-damage-inducible protein f, putative 78 9e-14
29606.m000099 DNA-damage-inducible protein f, putative 72 6e-12
>30169.m006452 DNA-damage-inducible protein f, putative
Length = 1569
Score = 634 bits (320), Expect = 0.0
Identities = 592/682 (86%), Gaps = 3/682 (0%)
Strand = Plus / Plus
Query: 58 tgcattttcttcaaggattttagacatgtacttaaaatggatgaacttggtttagaaata 117
||||||||||| || |||||||| |||| |||||| |||||||||| || |||||||||
Sbjct: 58 tgcattttctttaatgattttaggaatgtccttaaattggatgaactcgggttagaaata 117
Query: 118 gcaagcatagcattgcctgcagcactggctttgacagctgaccccattgcctctctagta 177
||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 118 gcacgtatagcattgcctgcagctctggctttgacagccgaccccattgcctctctggtg 177
Query: 178 gacacagcatttattggacaaataggtcctgtagagctagctgctgtgggagtttctatt 237
||||||||||||||||| ||||||||| | ||||| ||||||||||| ||||||||||||
Sbjct: 178 gacacagcatttattggccaaataggttcagtagaactagctgctgttggagtttctatt 237
Query: 238 gccctattcaatcaagtatcaagaatcgcaatattcccacttgtcagtgtaacaacctct 297
|| ||||| |||||||| || ||||||||||||||||||||||||||| | |||||||||
Sbjct: 238 gctctatttaatcaagtctcgagaatcgcaatattcccacttgtcagtatcacaacctct 297
Query: 298 tttgttgctgaagaagatactattggaagtgtgaaccctgaggtgcaagatagtgaatcc 357
||||||||||||||||||||||| ||||| ||| ||||| || ||||| |||||||
Sbjct: 298 tttgttgctgaagaagatactataggaagaatgactcctgatgtacaagaaagtgaattg 357
Query: 358 ttggaaacaggttcagttgttaacagtgaaagtaaagagttgataccacaaaatgtatct 417
||||| ||||||||| ||| || ||||||||||||||||||||||||||||| |||
Sbjct: 358 ttggagacaggttcaactgtaaa---tgaaagtaaagagttgataccacaaaatgactct 414
Query: 418 ggtgaaggtgcatacaaatcaaaatcagctatgagcagcttcgatattgctaaaatggag 477
| | |||||||| ||||||||||| | || |||||||| |||| |||||| || |||
Sbjct: 415 gcttctggtgcatataaatcaaaatcgcccattagcagctttgatactgctaacatcgag 474
Query: 478 agtggaagaaggcatattccctcagcctcatctgcattagttattggtgctatccttggc 537
| || ||||| ||||||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 475 aatgaaagaaagcatattccctcagcctcatccgcattggttatcggtgccatccttggc 534
Query: 538 ttcatccaagctatattccttatatcaggagcgaaaccattgttgaactttatgggagtg 597
||| ||||||| || || || ||||| ||||| ||||||||||| || || ||||||||
Sbjct: 535 ttcgtccaagcaatttttctcatatctggagcaaaaccattgttaaatttcatgggagtc 594
Query: 598 ggttctgattcacctatgttaagacctgctcaacaatatttgacattaaggtcacttggt 657
||||||||||||||||| | | ||||||||||||||||||||||| |||||||| |||
Sbjct: 595 agttctgattcacctatgctgacccctgctcaacaatatttgacattgaggtcactgggt 654
Query: 658 gctcctgcagttctcctttccttagccatgcaaggggtcttccgtggatttaaagatacg 717
||||||||| |||| |||||||| || |||||||| |||||||| ||||||||||| ||
Sbjct: 655 gctcctgcaattcttctttccttggcaatgcaaggagtcttccgcggatttaaagacaca 714
Query: 718 aagactcctttatatgccactg 739
||||||||||||||||||||||
Sbjct: 715 aagactcctttatatgccactg 736
>27810.m000635 DNA-damage-inducible protein f, putative
Length = 2721
Score = 121 bits (61), Expect = 7e-27
Identities = 145/173 (83%)
Strand = Plus / Plus
Query: 133 cctgcagcactggctttgacagctgaccccattgcctctctagtagacacagcatttatt 192
||||||||||| ||||| |||| || || |||| ||||| | ||||||||||| |||
Sbjct: 1330 cctgcagcacttgctttagcagcagatcctgttgcttctctgattgacacagcattcatt 1389
Query: 193 ggacaaataggtcctgtagagctagctgctgtgggagtttctattgccctattcaatcaa 252
|| || |||| ||||| ||||| ||||||||||| ||||||||||| |||| ||||||
Sbjct: 1390 ggccatttaggacctgtggagcttgctgctgtgggtgtttctattgctgtatttaatcaa 1449
Query: 253 gtatcaagaatcgcaatattcccacttgtcagtgtaacaacctcttttgttgc 305
||||||| || ||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 1450 gtatcaaagattgcaatattcccccttgtcagtgttacaacttcttttgttgc 1502
Score = 103 bits (52), Expect = 2e-21
Identities = 118/140 (84%)
Strand = Plus / Plus
Query: 600 ttctgattcacctatgttaagacctgctcaacaatatttgacattaaggtcacttggtgc 659
||||||||| || ||||||| ||| || |||||||| ||| ||| ||||| ||||||||
Sbjct: 1782 ttctgattctcccatgttaataccagcacaacaatacttggtattgaggtcgcttggtgc 1841
Query: 660 tcctgcagttctcctttccttagccatgcaaggggtcttccgtggatttaaagatacgaa 719
|||||| ||||| ||||| || |||||||||||||| || || ||| |||| ||||| ||
Sbjct: 1842 tcctgctgttcttctttctttggccatgcaaggggtttttcggggaattaaggatacaaa 1901
Query: 720 gactcctttatatgccactg 739
|||||||||||||| ||||
Sbjct: 1902 aactcctttatatgctactg 1921
>29606.m000098 DNA-damage-inducible protein f, putative
Length = 1641
Score = 77.8 bits (39), Expect = 9e-14
Identities = 87/103 (84%)
Strand = Plus / Plus
Query: 215 tagctgctgtgggagtttctattgccctattcaatcaagtatcaagaatcgcaatattcc 274
|||||||||| |||||||||||||| |||||||||| | ||||| | | |||||||
Sbjct: 212 tagctgctgtaggagtttctattgcgatattcaatcaggcatcaaaggttaccatattcc 271
Query: 275 cacttgtcagtgtaacaacctcttttgttgctgaagaagatac 317
|| | || ||| ||||||| |||||||||||||||||||||||
Sbjct: 272 cattggttagtataacaacttcttttgttgctgaagaagatac 314
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 703 ggatttaaagatacgaagactcctttatatgccac 737
|||||||||||||| || |||||||||||||||||
Sbjct: 781 ggatttaaagatacaaaaactcctttatatgccac 815
>29606.m000099 DNA-damage-inducible protein f, putative
Length = 1557
Score = 71.9 bits (36), Expect = 6e-12
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 178 gacacagcatttattggacaaataggtcctgtagagctagctgctgtgggagtttctatt 237
||||||||||||||||| || |||| | || || |||||||||| ||||||||||||
Sbjct: 175 gacacagcatttattggccatctaggagcggtggaaatagctgctgtaggagtttctatt 234
Query: 238 gccctattcaatcaagtatcaagaatcgcaatattcccacttgtcagtgtaacaacctct 297
|| || ||||||||| ||||| | | ||||||||| | ||| | ||||||| |||
Sbjct: 235 gcgataatcaatcaagcatcaaaggttaccatattcccattggtctatataacaacttct 294
Query: 298 tttgttgctgaagaagatac 317
||||||||||||||||||||
Sbjct: 295 tttgttgctgaagaagatac 314
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 703 ggatttaaagatacgaagactcctttatatgccac 737
|||||||||||||| || |||||||||||||||||
Sbjct: 697 ggatttaaagatacaaaaactcctttatatgccac 731