Jatropha Genome Database

JcCB0171281.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0171281.20 + phase: 0 /pseudo/partial
         (672 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014290 phospholipase d delta, putative                         194   5e-49

>30170.m014290 phospholipase d delta, putative
          Length = 2544

 Score =  194 bits (98), Expect = 5e-49
 Identities = 383/478 (80%)
 Strand = Plus / Plus

                                                                       
Query: 181 agaatcatcaccagtgacccttatgttacggtttgtctcgcgggagccacggtggctcgc 240
           ||||||||||| |||||||| || || || ||||| ||  | || || || || || |||
Sbjct: 187 agaatcatcacaagtgacccctacgtcaccgtttgcctgtcaggtgctacagtcgcacgc 246

                                                                       
Query: 241 acgcgcgtcatttctaacacgcaaaatcctttctggaacgagcatttcaagattccggtc 300
           |||||||| ||||| ||| | ||| |||||| ||||||||| |||||||||||||| |||
Sbjct: 247 acgcgcgtgatttcaaactctcaacatccttactggaacgaacatttcaagattcccgtc 306

                                                                       
Query: 301 gctcatccggccgatcacgtggagtttcacgtcaaagataacgacgtgtttggtgccgat 360
           ||||| || |||  |||||||||||||||||| |||||||| ||||||||||| || |||
Sbjct: 307 gctcaccctgccactcacgtggagtttcacgttaaagataatgacgtgtttggcgctgat 366

                                                                       
Query: 361 ttgattggaatagctagtgttccggttgaaaagttgatttcgggcgaaacgatcagcgaa 420
           || || ||| |||| | |||||| ||| | |   | || |||||||||||  | ||||| 
Sbjct: 367 ttaatcggagtagcaactgttcctgttaagagaatcatctcgggcgaaacagtaagcgac 426

                                                                       
Query: 421 tggttatcgataatcggtccttacggaaaaccgccaaaaccggattccgcaattcgtatt 480
           ||| |  |||||| || ||| ||||||||||| |||||||| ||||  ||||||||| | 
Sbjct: 427 tggcttccgataaccgatccctacggaaaaccaccaaaaccagattgtgcaattcgtgta 486

                                                                       
Query: 481 gaaatgaatttcatgcaatgccaggagaatccattatatcaatacggcattgccgcgagt 540
           |||||||| |||||||||||| |||| |||||| |||| || ||||| |||||||||  |
Sbjct: 487 gaaatgaaattcatgcaatgcgaggaaaatccactataccagtacggtattgccgcgtct 546

                                                                       
Query: 541 ccgaataatttcggcattgaaaattgttattttcctgtgagacggggcagttccgttacc 600
           || ||  | ||||| ||| | || ||||||||||| ||  | |  || |||||||| || 
Sbjct: 547 ccaaacgaattcggtattcagaactgttattttcccgtccgtcacgggagttccgtcacg 606

                                                                     
Query: 601 ctttatcaggacgcacacgtgccggactctttttcgcctgagattaaattggagaacg 658
           || |||||||| || ||||||||||| || |||| ||| ||||| || || |||||||
Sbjct: 607 ctgtatcaggatgcgcacgtgccggattcctttttgccggagataaagttagagaacg 664