Jatropha Genome Database

JcCB0170501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0170501.10 + phase: 0 
         (351 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30074.m001337 hypothetical protein                                    234   3e-61

>30074.m001337 hypothetical protein
          Length = 882

 Score =  234 bits (118), Expect = 3e-61
 Identities = 202/230 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  acttaaagaagatactgatcagatgatacaggcaaaaggacagatatgctcacagatatt 89
           |||||||||||| | ||| |  ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 156 acttaaagaagacattgagctaatgatacaggctaaagggcagatatgctcacagatatt 215

                                                                       
Query: 90  ggaaaaacagagaaagattgcttctttggagtctgattcatacacccttgcccagacact 149
           ||||||||||||||||||||||||||||||||  ||||| | ||| ||| ||||||||||
Sbjct: 216 ggaaaaacagagaaagattgcttctttggagttcgattcttccacactttcccagacact 275

                                                                       
Query: 150 ggaacttattcaacaagaaagagtcagtttatctgctaaactcgtagagaagagtgcata 209
           ||| ||||||||||||||||| |||||||||||||| |||||||||  |||||||| |||
Sbjct: 276 ggagcttattcaacaagaaagggtcagtttatctgccaaactcgtactgaagagtgaata 335

                                                             
Query: 210 ctatatcaaggttgcaaatgatattaatgccaaactacagcaacagcagg 259
           ||||  |||||||||| ||||  ||||| |||| || |||||||| ||||
Sbjct: 336 ctatgccaaggttgcagatgaacttaattccaagcttcagcaacaacagg 385