Jatropha Genome Database

JcCB0170011.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0170011.20 - phase: 1 /partial
         (155 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27798.m000585 α-carboxyl-tansferase (α-CT) subunit of ...   157   2e-38

>27798.m000585 α-carboxyl-tansferase (α-CT) subunit of
            Het-ACCase
          Length = 2301

 Score =  157 bits (79), Expect = 2e-38
 Identities = 109/119 (91%)
 Strand = Plus / Plus

                                                                        
Query: 33   agtcctgaagcatgtgcagcaattttatggaagagtgccaaagcttctccaaaggcggct 92
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 949  agtcctgaagcttgtgcagcaattttatggaagagtgccaaagcttctccaaaggcagcc 1008

                                                                       
Query: 93   gaaaaattgaagatcactgctactgagttgtgcaagttgcaaattgcagatggtgtcat 151
            ||||| ||||| |||||||||   ||||||||||  |||||||||||||||||||||||
Sbjct: 1009 gaaaagttgaaaatcactgctggggagttgtgcagattgcaaattgcagatggtgtcat 1067