Jatropha Genome Database
- JcCB0164341.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0164341.10 + phase: 0 /pseudo/partial
(864 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013806 transcription factor, putative 636 0.0
30162.m001290 transcription factor, putative 70 2e-11
29682.m000576 transcription factor, putative 64 1e-09
>30170.m013806 transcription factor, putative
Length = 1350
Score = 636 bits (321), Expect = 0.0
Identities = 489/545 (89%)
Strand = Plus / Plus
Query: 61 agatgggggaggctgatgaatctgggaccccagaggagagagcagcattcatgagggagc 120
||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||
Sbjct: 425 agatgggggaggctgatgaatctgggacccctgaggagcgagctgcattcatgagggagc 484
Query: 121 tagaaactttctgcagggacaatgccctggaatttaagcctccaaaattttacggagagc 180
| ||||||||| || ||| |||||||||||||| ||||| || |||||||| |||||||
Sbjct: 485 tggaaactttccacaaggaaaatgccctggaattcaagccccctaaattttatggagagc 544
Query: 181 cattaaattgcctgaagttatggagagctgttattaagttggggggctatgaagtggtca 240
|||| || ||| |||||||||||||| ||||||| | | || ||||||||||||||||
Sbjct: 545 cattgaactgcttgaagttatggagatctgttatcagactaggtggctatgaagtggtca 604
Query: 241 ctgcatccaagttatggcggcaagtaggagagtctttccatccccctaagacttgcacaa 300
|||||||||| || ||||||||||||||||||||||||||||| || || || || ||||
Sbjct: 605 ctgcatccaaattgtggcggcaagtaggagagtctttccatccgcccaaaacctgtacaa 664
Query: 301 ctgtttcttggacattccgcattttctatgagaaggcacttttggaatatgaaaagcata 360
| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cagtttcttggacgtttcgcattttctatgagaaggcacttttggaatatgaaaagcata 724
Query: 361 agaggcaaaatggtgagcttcaactccctagttcacccctgcatcagcctgctagcgttg 420
||||||||| ||| ||||||||||| ||||| ||||||| ||||||||||| || ||||
Sbjct: 725 agaggcaaagtggcgagcttcaacttcctagctcacccccacatcagcctgcaagtgttg 784
Query: 421 aaaaggaggtaagtggctaccaagcttcaggatctggtagggcaagaagggatgctgcag 480
|||| ||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 785 aaaaagaggtgagtggataccaagcaccaggatctggtagggcaaggagggatgctgcag 844
Query: 481 ctcgtgctatgcagggttggcatgctcaacgtcttcttggatatggcgaggttagcgagc 540
||||||||||||||||||||||||| ||||||||||||||| |||| || |||||||| |
Sbjct: 845 ctcgtgctatgcagggttggcatgcccaacgtcttcttggacatggtgaagttagcgaac 904
Query: 541 caattattaaggagaagagcctcaattctgcaccaaggcgtgaaaaacccctcaaaagca 600
||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 905 caattatcaaggacaggagtgtcaattctgcaccaaggcgtgaaaaacccctcaaaagca 964
Query: 601 ttggt 605
|||||
Sbjct: 965 ttggt 969
>30162.m001290 transcription factor, putative
Length = 1548
Score = 69.9 bits (35), Expect = 2e-11
Identities = 134/167 (80%)
Strand = Plus / Plus
Query: 195 aagttatggagagctgttattaagttggggggctatgaagtggtcactgcatccaagtta 254
|||||||||||||| || || || |||| ||||||||| ||| || ||| ||||||
Sbjct: 748 aagttatggagagcagtgatcaaactgggaggctatgaacaggtgacatcatgcaagttg 807
Query: 255 tggcggcaagtaggagagtctttccatccccctaagacttgcacaactgtttcttggaca 314
||||| ||||| ||||| || ||| ||||| ||||| || || |||||||||||||||
Sbjct: 808 tggcgtcaagtgggagaatcattcagacccccaaagacctgtactactgtttcttggaca 867
Query: 315 ttccgcattttctatgagaaggcacttttggaatatgaaaagcataa 361
|| || || || ||||| |||||| | | |||||||||||||||||
Sbjct: 868 tttcgaatattttatgaaaaggcattacttgaatatgaaaagcataa 914
>29682.m000576 transcription factor, putative
Length = 1971
Score = 63.9 bits (32), Expect = 1e-09
Identities = 164/208 (78%)
Strand = Plus / Plus
Query: 156 aagcctccaaaattttacggagagccattaaattgcctgaagttatggagagctgttatt 215
|||||||| || || || |||||| ||||||||| || ||||| |||||||| |||||
Sbjct: 1150 aagcctcctaagttctatggagagggattaaattgtctaaagttgtggagagcagttatg 1209
Query: 216 aagttggggggctatgaagtggtcactgcatccaagttatggcggcaagtaggagagtct 275
| |||| |||||||| ||| ||| ||| ||||| ||||||||||| ||||| ||
Sbjct: 1210 agactgggtggctatgataaggtgactacatgtaagttgtggcggcaagtgggagaatcc 1269
Query: 276 ttccatccccctaagacttgcacaactgtttcttggacattccgcattttctatgagaag 335
|| | ||||| ||||| || || |||||||| |||||||| || ||| |||||||||
Sbjct: 1270 tttaaacccccaaagacatgtactactgtttcatggacatttcgaggtttttatgagaag 1329
Query: 336 gcacttttggaatatgaaaagcataaga 363
|||||| | || ||||| | ||||||||
Sbjct: 1330 gcacttcttgattatgagaggcataaga 1357
Score = 52.0 bits (26), Expect = 6e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 471 gatgctgcagctcgtgctatgcagggttggcatgctcaacgtcttcttgg 520
||||||||||| |||||||||||||| ||||| | ||||| ||||||||
Sbjct: 1450 gatgctgcagcacgtgctatgcagggctggcactcgcaacgccttcttgg 1499