Jatropha Genome Database
- JcCB0163231.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0163231.10 - phase: 0 /partial
(912 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007230 conserved hypothetical protein 375 e-103
>30131.m007230 conserved hypothetical protein
Length = 1359
Score = 375 bits (189), Expect = e-103
Identities = 360/417 (86%)
Strand = Plus / Plus
Query: 496 tcaatttcaagcatggatttcatgggacttaactttgcggataagaaacggggcaaggga 555
|||||||||||||| |||||||||||||| |||||||||||||||||| || | |||
Sbjct: 469 tcaatttcaagcattgatttcatgggactcaactttgcggataagaaaactggaaggggg 528
Query: 556 ctgcctcctggattgaccccagtcacagactcttttccaggaggggacttacctgaagtt 615
|||| |||||||| ||||||||| |||| ||||||||| |||| |||| ||||||||
Sbjct: 529 ttgccagctggattggccccagtcatagacccttttccagaagggaacttgcctgaagtg 588
Query: 616 gagataattgttggagacacaagcaagtttggggacccgacaacatcaatgcctaagcct 675
||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||||||
Sbjct: 589 gagataattgttggagacacagacaactttgatgacccaacaacatcaatgcctaagcct 648
Query: 676 agccaagaaaatgattcagaattttacaagccaaaggtttcaacatggggtgtctttcca 735
|||||||| | |||||| |||| ||||| |||||||| || |||||||| |||||
Sbjct: 649 agccaagatgaaagttcagatgtttataagcccaaggtttctacttggggtgtgtttcct 708
Query: 736 agacctggaaatatttccaagacgtttggtggtggtagaactattcgccctggagatgtg 795
||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 709 agacctggaaacatttccaagacgtttggtggtggaagaaccattcgccctggagatgtg 768
Query: 796 cttgaaacagcagaagaacgaacggctaaagatgagcgcacaaagcaattacttgcagct 855
|||||||||||||||||||| | || |||||||| |||||||| ||||||||||||||
Sbjct: 769 cttgaaacagcagaagaacgggctgccaaagatgatcgcacaaaacaattacttgcagcc 828
Query: 856 tacaggaaaaaagttggcttaaatgttgatccaaagctgaaacttgagtgtgagaag 912
|| ||||| ||| | ||||||| | ||||||||||| | ||| | ||||||||||||
Sbjct: 829 tataggaagaaaatgggcttaagtattgatccaaagataaaattcgagtgtgagaag 885
Score = 107 bits (54), Expect = 1e-22
Identities = 161/199 (80%), Gaps = 12/199 (6%)
Strand = Plus / Plus
Query: 175 cctgtaaagctcgcttttgagaaagctaaagcatataagaaatcgactggagacagcaag 234
||||| |||||||||||||||||||||||||||||||||||| | | || ||| | ||||
Sbjct: 172 cctgtgaagctcgcttttgagaaagctaaagcatataagaaaacaattgaagagaccaag 231
Query: 235 aaaacgaaacttgggcaaaatctagttaagggttctggtggttcttcagttgggaataat 294
||| ||||||||| |||||| | |||| |||||||| | ||||||||||
Sbjct: 232 aaagcgaaacttgagcaaaacccagttgagggttct------------gctgggaataat 279
Query: 295 gggaaagatgaggaagtgccagcctcagttaaggttgcgatggagaacgcaaaggagtac 354
||||||||| ||||||| || | || ||||||||||| |||||||| || | ||| |||
Sbjct: 280 gggaaagataaggaagtcccggtttcggttaaggttgccatggagaaagccagggaatac 339
Query: 355 aagaagaataaaggggttg 373
||||||||| ||| |||||
Sbjct: 340 aagaagaatcaagtggttg 358