Jatropha Genome Database

JcCB0162471.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0162471.10 + phase: 1 /pseudo/partial
         (377 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28693.m000104 Aspartic proteinase nepenthesin-1 precursor, putative   105   2e-22

>28693.m000104 Aspartic proteinase nepenthesin-1 precursor, putative
          Length = 1602

 Score =  105 bits (53), Expect = 2e-22
 Identities = 158/194 (81%), Gaps = 8/194 (4%)
 Strand = Plus / Plus

                                                                        
Query: 69   ttgtcaaaagtggagatgtaaatatcatcggaca--------tgacgggttatcttattg 120
            ||||||||||||||||||||||||| || |||||        |||| ||||||| ||| |
Sbjct: 1274 ttgtcaaaagtggagatgtaaatataattggacaaaatttcatgactggttatcgtatag 1333

                                                                        
Query: 121  ttttcaatcgtgaaaggaacgtgttgggttggaagccatcaaactgttatgatgctttga 180
            |||| ||||||||||| || || ||||| |||||| ||||| | |||||||||| | || 
Sbjct: 1334 tttttaatcgtgaaagaaatgtattgggatggaaggcatcagattgttatgatgatatgg 1393

                                                                        
Query: 181  acaccaacaccttccctatcaacccattaagtcctgcagtgccacctgctactgcagtca 240
            |||||| |||||||||  || ||||  ||||||||| | | || ||||||||||||||||
Sbjct: 1394 acaccaccaccttccccgtcgacccgataagtcctggaatccctcctgctactgcagtca 1453

                          
Query: 241  atccagaagccaca 254
            | ||| ||||||||
Sbjct: 1454 acccacaagccaca 1467



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                  
Query: 340  caattataatggttcttattccattctttatcattgtt 377
            |||||||||||||||||||||||||||||| |||||||
Sbjct: 1562 caattataatggttcttattccattctttaccattgtt 1599