Jatropha Genome Database
- JcCB0161621.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0161621.10 - phase: 0 /partial
(546 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29602.m000209 rac gtpase, putative 446 e-125
30170.m014385 rac gtpase, putative 280 8e-75
28962.m000460 rac gtpase, putative 208 3e-53
29646.m001113 rac gtpase, putative 129 2e-29
29900.m001556 rac gtpase, putative 88 6e-17
29912.m005491 rac gtpase, putative 66 2e-10
30147.m013989 rac gtpase, putative 64 9e-10
>29602.m000209 rac gtpase, putative
Length = 597
Score = 446 bits (225), Expect = e-125
Identities = 300/325 (92%)
Strand = Plus / Plus
Query: 121 tatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcacagtc 180
||||| |||||||| |||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 103 tatgttcctactgtatttgacaatttcagtgccaatgttgttgtggatgggagcacagtc 162
Query: 181 aatctagggttgtgggatactgctggccaggaagattataatagattaagacctttgagc 240
||||||||| | ||||||||||| |||||||||||||| ||||||||||||||| | |||
Sbjct: 163 aatctagggctatgggatactgcaggccaggaagattacaatagattaagacctctaagc 222
Query: 241 tatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttatgaa 300
||||| ||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 223 tatcgcggggcagatgtttttctgcttgcattctctctcattagcaaggccagctatgaa 282
Query: 301 aatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaattatc 360
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aatgttgcaaaaaaatggattcctgaattgaggcattatgcacctggagtaccaattatt 342
Query: 361 cttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccctggt 420
|||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 343 cttgttggaactaagcttgatctccgagatgataagcaattccttatagaccaccctggt 402
Query: 421 gcagtgcccatcaccacagctcagg 445
||||||||||| |||||||||||||
Sbjct: 403 gcagtgcccattaccacagctcagg 427
>30170.m014385 rac gtpase, putative
Length = 594
Score = 280 bits (141), Expect = 8e-75
Identities = 282/329 (85%)
Strand = Plus / Plus
Query: 117 ggactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcac 176
||||||||| || ||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 99 ggactatgtaccaactgtttttgacaatttcagtgcaaatgtggttgtggatgggagcac 158
Query: 177 agtcaatctagggttgtgggatactgctggccaggaagattataatagattaagaccttt 236
|||||| | || || |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 159 tgtcaatttgggattatgggatactgctggccaggaggattacaatagattaagaccttt 218
Query: 237 gagctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagtta 296
|||||| || || || || || || | ||||| |||||| | || ||||||||||| ||
Sbjct: 219 gagctaccgaggcgcagacgtctttatccttgcattctctttaatcagcaaggccagcta 278
Query: 297 tgaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaat 356
|||||||||||| || |||||||| |||||| |||||||||| ||||||||||| |||||
Sbjct: 279 tgaaaatgttgccaaaaagtggatacctgaactgaggcattacgcacctggagttccaat 338
Query: 357 tatccttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccc 416
||| |||||||| || || |||||||| || || |||||||| |||||||| || || ||
Sbjct: 339 tattcttgttggaacaaaacttgatcttcgggaggataagcagttcttcattgaccatcc 398
Query: 417 tggtgcagtgcccatcaccacagctcagg 445
|||||||||||| || || || |||||||
Sbjct: 399 tggtgcagtgcctataactactgctcagg 427
>28962.m000460 rac gtpase, putative
Length = 594
Score = 208 bits (105), Expect = 3e-53
Identities = 270/325 (83%)
Strand = Plus / Plus
Query: 121 tatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcacagtc 180
|||||||| ||||| || ||||| |||||||| |||||||| || | || ||| ||
Sbjct: 103 tatgtgccaactgttttcgacaatttcagtgcaaatgtggtcgtcaacggtgccactgtt 162
Query: 181 aatctagggttgtgggatactgctggccaggaagattataatagattaagacctttgagc 240
|| || |||||||||||||| ||||| || || ||||| ||||||||||||||||| ||
Sbjct: 163 aacctggggttgtgggatacagctgggcaagaggattacaatagattaagacctttaagt 222
Query: 241 tatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagttatgaa 300
|| ||||| || ||||||||| | || || ||||| |||||||||||||||||||| |||
Sbjct: 223 taccgtggagccgatgttttcatactggcattctccctcattagcaaggccagttacgaa 282
Query: 301 aatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtaccaattatc 360
|||||| | |||||||||||||| || |||| |||||||||||||| || |||||| |
Sbjct: 283 aatgtttctaagaagtggattccggagttgaaacattatgcacctggggtcccaattgtt 342
Query: 361 cttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcaccctggt 420
||||| || || ||||||||||| || ||||| ||||||||||| |||| |||||||||
Sbjct: 343 cttgtgggcacaaagcttgatcttcgggatgacaagcaattctttgtagaccaccctggt 402
Query: 421 gcagtgcccatcaccacagctcagg 445
|| ||||| || || ||||||||||
Sbjct: 403 gctgtgcctattactacagctcagg 427
>29646.m001113 rac gtpase, putative
Length = 594
Score = 129 bits (65), Expect = 2e-29
Identities = 101/113 (89%)
Strand = Plus / Plus
Query: 127 cctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcacagtcaatcta 186
||||| |||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 109 cctacggtgtttgacaacttcagtgctaatgtagttgttgatggcagcacagtcaatctt 168
Query: 187 gggttgtgggatactgctggccaggaagattataatagattaagacctttgag 239
|| |||||||||||||| || |||||||||||||| ||||| || ||||||||
Sbjct: 169 ggcttgtgggatactgcaggacaggaagattataacagattgaggcctttgag 221
>29900.m001556 rac gtpase, putative
Length = 594
Score = 87.7 bits (44), Expect = 6e-17
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 136 tttgacaacttcagtgcgaatgtggttgtggatgggagcacagtcaatctagggttgtgg 195
|||||||| || ||||| |||||||| || ||||| || ||||| ||||| || || |||
Sbjct: 118 tttgacaattttagtgctaatgtggtggtagatggtagtacagtgaatcttggattatgg 177
Query: 196 gatactgctggccaggaagattataatagattaagacctttgagctatcgtggggctgat 255
|| || ||||| |||||||||||||| || | || || |||| || | || ||||||
Sbjct: 178 gacacggctgggcaggaagattataacaggctgaggccactgagttacagaggagctgat 237
Query: 256 gttttcttgcttgctttctctctcattagcaaggccagttatga 299
|| |||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 238 gtattcttgttggctttttctctcattagcaaggccagttatga 281
>29912.m005491 rac gtpase, putative
Length = 630
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 136 tttgacaacttcagtgcgaatgtggttgtggatgggagcacagtcaatctagggttgtgg 195
||||| || |||||||| ||||||| ||||||||||| || |||||||| || || |||
Sbjct: 118 tttgataatttcagtgctaatgtggctgtggatgggaacattgtcaatctgggattatgg 177
Query: 196 gatactgctggccaggaagattata 220
|||||||| || ||||| |||||||
Sbjct: 178 gatactgcaggtcaggaggattata 202
>30147.m013989 rac gtpase, putative
Length = 636
Score = 63.9 bits (32), Expect = 9e-10
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 130 actgtgtttgacaacttcagtgcgaatgtggttgtggatgggagcacagtcaatctaggg 189
||||||||||||||||||||||| ||||| || || || || | ||| ||||| ||||
Sbjct: 118 actgtgtttgacaacttcagtgcaaatgttgtagttgaaggaaccactgtcaacttaggc 177
Query: 190 ttgtgggatactgctggccaggaagattataatagattaagacctttgagctatcgtggg 249
| ||||| || ||||| || ||||| ||||| |||||||| || |||||||| | |||
Sbjct: 178 ctctgggacacagctggacaagaagactataacagattaaggcccttgagctacagaggg 237
Query: 250 gctgatgt 257
||||||||
Sbjct: 238 gctgatgt 245