Jatropha Genome Database

JcCB0161221.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0161221.10 - phase: 0 
         (399 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29762.m000496 ubiquitin-activating enzyme E1, putative                206   7e-53

>29762.m000496 ubiquitin-activating enzyme E1, putative
          Length = 1404

 Score =  206 bits (104), Expect = 7e-53
 Identities = 146/160 (91%)
 Strand = Plus / Plus

                                                                       
Query: 195 attatcgtctgatatgatttaccgttacagtcgtcatctcttactcccttcctttggagt 254
           ||||||||||||||||||||| ||||||||||||||||| || || ||||| |||||| |
Sbjct: 195 attatcgtctgatatgatttatcgttacagtcgtcatcttttgctgccttcttttggaat 254

                                                                       
Query: 255 tcaaggccagtcaaatctgttaaagtcttctattttagttgtcggagctggagggttggg 314
           |||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 255 tcaagggcagtcaaatctgttaaagtcttctattttagttgttggagctggaggattggg 314

                                                   
Query: 315 gtcgcctgctctgttatatcttgcagcttgcggtgttggt 354
            || |||||| |||||||||| |||||||| |||||||||
Sbjct: 315 ctctcctgctttgttatatctggcagcttgtggtgttggt 354