Jatropha Genome Database

JcCB0159671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0159671.10 + phase: 0 /pseudo/partial
         (678 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008623 Zeta-carotene desaturase, chloroplast precursor, p...   680   0.0  

>30128.m008623 Zeta-carotene desaturase, chloroplast precursor,
            putative
          Length = 2895

 Score =  680 bits (343), Expect = 0.0
 Identities = 490/539 (90%)
 Strand = Plus / Plus

                                                                        
Query: 7    aacaagaaagttgtaaaagctgatgcttatgtagcagcatgtgatgtccctggaattaaa 66
            |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 1039 aacaagaaagttgtgaaagctgatgcttatgttgcagcatgtgatgtccctggaatcaaa 1098

                                                                        
Query: 67   agattacttccatcccagtggagggaatctcagtttttcaataatatatatgaactagtt 126
            |||||||||||||| ||||||||||||||  |||||||  ||||||| ||||| ||||||
Sbjct: 1099 agattacttccatctcagtggagggaatcaaagttttttgataatatttatgagctagtt 1158

                                                                        
Query: 127  ggagtacctgttgtcacagtgcaacttaggtataatggctgggtcacagaattgcaggat 186
            |||||||||||||| || || |||||||| ||| ||||||||||||| || || || |||
Sbjct: 1159 ggagtacctgttgtaacggttcaacttagatatgatggctgggtcacggagttacaagat 1218

                                                                        
Query: 187  cttgaacgatcaaggcaattgaggcaagctcttggtttagataatcttctgtacactcca 246
            || || |||||||||||||  ||||||||| | ||||||||||| |||||||||||||||
Sbjct: 1219 ctagagcgatcaaggcaatcaaggcaagctgtgggtttagataaccttctgtacactcca 1278

                                                                        
Query: 247  gatgcggacttttcttgttttgcagacctagcactcacttctccagaagattactacatt 306
            ||||| || |||||||||||||| ||| |||||||||||||||| |||||||||||||||
Sbjct: 1279 gatgcagatttttcttgttttgcggacttagcactcacttctccggaagattactacatt 1338

                                                                        
Query: 307  gaaggacaaggttcattgctccaatgtgtccttacaccaggtgatccttacatgcccttg 366
            ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1339 gaaggacaaggatcattgctccaatgtgttcttacacccggtgatccttacatgcccttg 1398

                                                                        
Query: 367  tcaaatgatgaaatcataaacagagtctctaagcaggttctggctttatttccatcatcc 426
              |||||| ||||||||||| ||||| || ||||||||| || |||||||||| ||||||
Sbjct: 1399 gtaaatgaagaaatcataaagagagtatcaaagcaggttttgactttatttccgtcatcc 1458

                                                                        
Query: 427  caaggcttagaagttatctggtcatctgtagtaaaaattgggcaatccttatatcgcgag 486
            ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| 
Sbjct: 1459 caaggcttagaggttatctggtcatccgtagtaaaaattgggcaatctttatatcgcgaa 1518

                                                                       
Query: 487  ggacctggaaaagatcccttcagaccagatcaaaagacacctgtaaaaaatttcttcct 545
            |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1519 ggacctggcaaagatcccttcagaccagatcaaaagacacctgtgaaaaatttcttcct 1577