Jatropha Genome Database

JcCB0158591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0158591.10 + phase: 2 /partial
         (247 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m003942 LIGULELESS1 protein, putative                           202   7e-52

>30138.m003942 LIGULELESS1 protein, putative
          Length = 1674

 Score =  202 bits (102), Expect = 7e-52
 Identities = 195/226 (86%)
 Strand = Plus / Plus

                                                                        
Query: 20   ttgggctccatactgatacctgatggaagtgatgccataaattttgatgtcacagatggt 79
            ||||| ||||||||| || ||||||| || |||||||| |||||||   || | ||||| 
Sbjct: 1444 ttgggatccatactgttatctgatggtagcgatgccatcaattttgtcatcgctgatggg 1503

                                                                        
Query: 80   atttaccaaggatcagattttatgaatgctaagggtagtctttcatgcgaagatggtact 139
            || |||||||||||| ||||||||||||| || | | ||||||| || |||||||| |||
Sbjct: 1504 atgtaccaaggatcaaattttatgaatgcaaaagattgtctttcttgtgaagatggcact 1563

                                                                        
Query: 140  actgttgacttgcttcagctgtcatcacagcttcagcgagtagaacatcagaagcaatcc 199
            ||  ||||||||||||||||||||||||||||| ||||||| ||||  ||||||||||||
Sbjct: 1564 accattgacttgcttcagctgtcatcacagcttgagcgagtggaacgacagaagcaatcc 1623

                                                          
Query: 200  atgcaagtgaagcaggaaaatgatgctctgtgctggccccacatca 245
            ||||||||||| ||||||||||||||| | |||||||| |||||||
Sbjct: 1624 atgcaagtgaaacaggaaaatgatgctttctgctggcctcacatca 1669