Jatropha Genome Database

JcCB0156721.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0156721.20 - phase: 0 
         (405 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014075 50S ribosomal protein L31, putative                     184   3e-46

>30170.m014075 50S ribosomal protein L31, putative
          Length = 405

 Score =  184 bits (93), Expect = 3e-46
 Identities = 216/257 (84%)
 Strand = Plus / Plus

                                                                       
Query: 104 tgcaggtgacctgcaggaagaaagatatacacccgcaattctatgaggatgctaaggtgt 163
           |||||||||| |||||||| ||||| || |||||| ||||  ||||||| ||||| ||||
Sbjct: 104 tgcaggtgacgtgcaggaaaaaagacattcacccggaatttcatgaggacgctaaagtgt 163

                                                                       
Query: 164 actgcaatggggaactggttatgactaccggtggaacccagaaggagtatgtggttgatg 223
           | |||||||| ||| |||| ||||| || ||||| || ||||||||||| || |||||||
Sbjct: 164 attgcaatggagaattggtgatgaccacaggtgggactcagaaggagtacgtagttgatg 223

                                                                       
Query: 224 tttggtccggcaaccacccattctacctcggaaaccgctccgccgttgttgtagacgccg 283
           |||||||||| ||||| || || |||||||| |||||||| || ||  |||| |||||||
Sbjct: 224 tttggtccggtaaccatccgttttacctcggtaaccgctcggctgtccttgtcgacgccg 283

                                                                       
Query: 284 accaggtggagaaattccggaagaaattcggtgagctctctcagcttatggaaatccctg 343
           ||||||| ||||| || || || |||||||||||  | |||||| |||||||||| ||||
Sbjct: 284 accaggtcgagaagtttcgcaaaaaattcggtgaattgtctcagattatggaaattcctg 343

                            
Query: 344 tcctcaaaggcgaaatt 360
           | || ||||||||||||
Sbjct: 344 ttcttaaaggcgaaatt 360