Jatropha Genome Database
- JcCB0156231.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0156231.10 + phase: 0 /partial
(312 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013632 conserved hypothetical protein 262 1e-69
28359.m000279 conserved hypothetical protein 149 1e-35
29955.m001180 conserved hypothetical protein 58 3e-08
>30170.m013632 conserved hypothetical protein
Length = 2289
Score = 262 bits (132), Expect = 1e-69
Identities = 267/312 (85%)
Strand = Plus / Plus
Query: 1 atgtgggatactgtgcaacaaattgccatttacatacataggtttcacaaccttgacctt 60
|||||||| |||||||| ||||||| |||||||| |||| |||||||||||||||||||
Sbjct: 1 atgtgggacgctgtgcaagaaattgcgatttacatccataagtttcacaaccttgacctt 60
Query: 61 tttcagcaaggattctatcaaattaaggttacgatgagatgggaagatagtgaatatgct 120
|| || ||||||||||||||||| ||||||| |||||||||||||||| || |||| ||
Sbjct: 61 ttccaacaaggattctatcaaatcaaggttagcatgagatgggaagataatgcatatact 120
Query: 121 agtattggtactcctgctagagttgttcaatatgaagcacatgatatggattctgacagc 180
| | | || |||||||| || |||||||| |||||||| |||| ||| |||| | |
Sbjct: 121 actttgggaactcctgccagggttgttcagtatgaagctaatgacttgggttctaatgac 180
Query: 181 atctatggggcatggagaatcaatgatacagacaatagtttcttaacacagccttttcgg 240
|| | |||| ||||||| |||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 181 atttgtgggacatggaggatcaatgatatagacaatagtttcttaacacagccctttcgg 240
Query: 241 atcaaatatgcgaggcaagatgtttatttatccgtcatgatctcgtttgatctatctctt 300
|| |||||||||||||| ||||||| |||||| |||||| | ||||| | |||||||||
Sbjct: 241 attaaatatgcgaggcaggatgtttgtttatctgtcatggtttcgttcgttctatctcta 300
Query: 301 agtaaatataag 312
||||||||||||
Sbjct: 301 agtaaatataag 312
>28359.m000279 conserved hypothetical protein
Length = 2427
Score = 149 bits (75), Expect = 1e-35
Identities = 246/303 (81%)
Strand = Plus / Plus
Query: 1 atgtgggatactgtgcaacaaattgccatttacatacataggtttcacaaccttgacctt 60
|||| ||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 118 atgttggatactgttcaagaaattgctatttacatacataggtttcacaatcttgacctt 177
Query: 61 tttcagcaaggattctatcaaattaaggttacgatgagatgggaagatagtgaatatgct 120
|| ||||| |||| |||||||||||| | | ||||||||||||||||||| ||| ||
Sbjct: 178 ttccagcagggatggtatcaaattaagatcagtgtgagatgggaagatagtgagtatact 237
Query: 121 agtattggtactcctgctagagttgttcaatatgaagcacatgatatggattctgacagc 180
| |||| |||||||| || ||||| |||||||| | ||||| ||| |||||| | |
Sbjct: 238 tctgttggaactcctgcaagggttgtccaatatgactctcatgacttgggttctgataac 297
Query: 181 atctatggggcatggagaatcaatgatacagacaatagtttcttaacacagccttttcgg 240
| ||||| | |||||| || ||||||||||||| ||||||| || || ||||||||
Sbjct: 298 acgtatggagtatggaggattgatgatacagacaacagtttctctacgcaaccttttcga 357
Query: 241 atcaaatatgcgaggcaagatgtttatttatccgtcatgatctcgtttgatctatctctt 300
|| ||||| || | ||||||| ||| | |||| |||||||||| || ||||||| |||
Sbjct: 358 attaaatacgccaagcaagatatttgtctatctatcatgatctcattcaatctatccctt 417
Query: 301 agt 303
|||
Sbjct: 418 agt 420
>29955.m001180 conserved hypothetical protein
Length = 2067
Score = 58.0 bits (29), Expect = 3e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 23 ttgccatttacatacataggtttcacaaccttgacctttttcagcaaggattctatcaaa 82
|||| |||||||| ||||||||||| || ||||||||||| || ||||||| ||||| |
Sbjct: 107 ttgctatttacattcataggtttcataatcttgaccttttccaacaaggatggtatcaga 166
Query: 83 ttaag 87
|||||
Sbjct: 167 ttaag 171