Jatropha Genome Database
- JcCB0156001.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0156001.10 - phase: 2 /partial
(757 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28725.m000310 RNA splicing protein mrs2, mitochondrial, putative 777 0.0
>28725.m000310 RNA splicing protein mrs2, mitochondrial, putative
Length = 1362
Score = 777 bits (392), Expect = 0.0
Identities = 665/756 (87%)
Strand = Plus / Plus
Query: 1 tgagcttccgtttgagtttcaggttcttgaggttgcattggaggttgtctgcacatattt 60
||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||| |||||
Sbjct: 603 tgagcttccatttgagtttcaggttctggagattgcattagaggttgtctgcacctattt 662
Query: 61 ggactccaatgtggcagacctagagagagatgcttatcctgttttggatgagttagccag 120
|||||||||||||||||| ||||||||||||||||||||||||| ||||| | |||||
Sbjct: 663 ggactccaatgtggcagatttagagagagatgcttatcctgttttagatgaactggccag 722
Query: 121 gaatgttagcaccaagaatcttgaacatgtgcgaagtttaaaaagcaatctcacgcgtct 180
||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 723 gaatgttagcaccaagaatcttgaacatgtgcgaagtctgaaaagcaatctcacacgtct 782
Query: 181 acttgcacgcgtgcagaaggtgagggatgaaattgaacatctactagatgataatgaaga 240
|||||||| ||||| |||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 783 gcttgcacgtgtgcaaaaggtgagagatgaaattgaacatttattagatgataatgaaga 842
Query: 241 tatggcagatttatatttgacaaggaagtggatccagaatcagcaatctgaggctttatt 300
||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 843 tatggcagacttatatttgacgagaaagtggatccagaatcagcaatctgaggctttatt 902
Query: 301 gggacctgccgcgtcaaatggcattctccctgctgccccacacctccatcgacttaattc 360
|||| |||| || || ||| |||| || ||||| |||| || |||| ||| ||||||||
Sbjct: 903 gggagctgcagcttcgaatagcatcatcactgctacccctcatctccctcgccttaattc 962
Query: 361 ttgtcacagtgcgagtatgatgactggcggcagtttggatcaagatgatgtggaagaatt 420
| ||| |||||| ||| || | |||||| ||| ||||||| || |||||||||| || ||
Sbjct: 963 tagtcgcagtgcaagtctggttactggcagcattttggatgaaaatgatgtggaggactt 1022
Query: 421 ggagatgctgtttgaagcttattttatgcagttggatggaacacgtaacaagattttgtc 480
||| |||||| | ||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 1023 ggaaatgctgctcgaagcttattttatgcagttggatggaacgcgcaacaagatcttgtc 1082
Query: 481 tgttcgtgagtatattgatgatacggaagactatgtcaacatccaacttgacaaccagcg 540
||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 1083 tgttcgtgagtatattgatgacaccgaagactatgtcaacatccaactcgacaaccagcg 1142
Query: 541 aaatgaactcattcaactgcagctgacattaactattgcatcatttgcaatagcattgga 600
|||||||||||||||||| |||||||||||||| |||||||||||||| || ||| ||||
Sbjct: 1143 aaatgaactcattcaacttcagctgacattaaccattgcatcatttgctattgcaatgga 1202
Query: 601 taccttgatagcaggattctttggcatgaatattccttgtcgatggtaccatatggatgg 660
||| ||| | ||| ||||||||||||||||||||||| |||| ||| | ||||| ||
Sbjct: 1203 tactttgctggcatctttctttggcatgaatattccttgccgattatacgagatggacgg 1262
Query: 661 aatatttgactactttgttggagttagttcagcgggatgtttcttacttttcctgctcat 720
|||||| ||||||||||||| || ||||| | ||||||||| |||||| |||| |
Sbjct: 1263 ggtatttggctactttgttggaagtacctcagcagcatgtttcttgcttttcatgcttgt 1322
Query: 721 tcttggatatgctagatggaagaagctactcggttc 756
||| || |||||||||||||||||||| || |||||
Sbjct: 1323 tctagggtatgctagatggaagaagctgcttggttc 1358