Jatropha Genome Database

JcCB0155101.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0155101.10 + phase: 0 /partial/short
         (92 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013798 26S proteasome non-atpase regulatory subunit, puta...   111   6e-25

>30147.m013798 26S proteasome non-atpase regulatory subunit, putative
          Length = 1161

 Score =  111 bits (56), Expect = 6e-25
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    cctgatgcaaagaatgctctgtaccaagccactatcaagcaaggagacttcttattaaac 60
            |||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||
Sbjct: 1066 cctgatgcaaagaatgctctttaccaagccaccatcaagcaaggggatttcttattaaac 1125

                                            
Query: 61   cggatccagaagctatctcgtgtgattgatct 92
            || ||||||||| | || ||||| ||||||||
Sbjct: 1126 cgaatccagaagttgtcccgtgttattgatct 1157