Jatropha Genome Database
- JcCB0154921.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0154921.10 + phase: 0
(1089 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29905.m000443 transcription factor, putative 303 1e-81
30138.m003959 transcription factor, putative 168 4e-41
>29905.m000443 transcription factor, putative
Length = 1134
Score = 303 bits (153), Expect = 1e-81
Identities = 249/281 (88%)
Strand = Plus / Plus
Query: 113 caacaccatggttaagattgaaagatccaagaattgttcgggtttcgcgtgcttttggag 172
|||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 98 caacaccatggttaagattgaaggatccgagaattgttcgtgtttcgcgtgcttttggag 157
Query: 173 gaaaagataggcatagtaaagtttgcactataaggggattgagagacagaagagttaggc 232
|||| || ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |
Sbjct: 158 gaaaggacaggcacagcaaagtctgcacaataaggggattaagagacaggagagttagac 217
Query: 233 tttcagttccaacagccatccaattgtatgatcttcaagataggcttggacttaatcaac 292
|||| ||||| ||||| ||||| ||||||||||||||||||| |||||| |||||||| |
Sbjct: 218 tttctgttcctacagcaatccagttgtatgatcttcaagataagcttggtcttaatcagc 277
Query: 293 ctagtaaagttgttgattggttactaaatgcagctaagcatgaaattgatgaactccctc 352
|||| || |||||||||||||| || || || || || ||||||||||||||||||||||
Sbjct: 278 ctagcaaggttgttgattggttgcttaacgctgcgaaacatgaaattgatgaactccctc 337
Query: 353 cacttccaattccaccagtcaattttgccctaaaccatcaa 393
|||||||||| |||||| | ||||||| ||| |||||||||
Sbjct: 338 cacttccaatgccaccaatgaattttggcctgaaccatcaa 378
Score = 61.9 bits (31), Expect = 7e-09
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 897 acaaataaaccactttcagatgttgactccaagcgcccaaaccctattcccaaattctct 956
|||||| ||||||||||||||||| | ||||| | |||| ||| || || ||||| ||
Sbjct: 939 acaaatgaaccactttcagatgttagcatcaagcactcaaaacctctttcccaattcact 998
Query: 957 tactccaactccattctctttaaatcaatctgctagacctttccatttcag 1007
||| |||| | ||| |||| | |||||||| || |||||||||||||||||
Sbjct: 999 tacgccaagttcatactctatgaatcaatcagcaagacctttccatttcag 1049
Score = 60.0 bits (30), Expect = 3e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 709 caattagaacatccaagttttcctttatctcatatgggaagccatggatttgtaagtcaa 768
|||||||||||||||| ||| || || ||||| ||||||||||||| |||| || ||||
Sbjct: 730 caattagaacatccaaatttcccattttctcacatgggaagccatgcattttcaaatcaa 789
Query: 769 acagat 774
||||||
Sbjct: 790 acagat 795
>30138.m003959 transcription factor, putative
Length = 1116
Score = 168 bits (85), Expect = 4e-41
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 137 atccaagaattgttcgggtttcgcgtgcttttggaggaaaagataggcatagtaaagttt 196
||||||||||||| || ||||||||| |||| |||||||||||||||||||| || ||||
Sbjct: 119 atccaagaattgtacgcgtttcgcgttctttcggaggaaaagataggcatagcaaggttt 178
Query: 197 gcactataaggggattgagagacagaagagttaggctttcagttccaacagccatccaat 256
|||||||||| |||||||||||||| ||| | |||||||| ||||| ||||| ||||| |
Sbjct: 179 gcactataagaggattgagagacaggagaatcaggctttctgttcccacagcgatccagt 238
Query: 257 tgtatgatcttcaagataggcttgg 281
| |||||||||||||||||||||||
Sbjct: 239 tatatgatcttcaagataggcttgg 263