Jatropha Genome Database
- JcCB0154661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0154661.10 - phase: 0 /partial
(564 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007163 Transcription factor HBP-1b(c1), putative 737 0.0
28883.m000741 Transcription factor HBP-1b(c1), putative 115 3e-25
>30131.m007163 Transcription factor HBP-1b(c1), putative
Length = 1392
Score = 737 bits (372), Expect = 0.0
Identities = 504/548 (91%)
Strand = Plus / Plus
Query: 1 ggagatcaagcccattcaatgagcggaaatggagcaatggcatttgatgtggaatatgca 60
||||||||||| ||||| ||||| |||||||| || |||||||||||||||||||||||
Sbjct: 694 ggagatcaagcacattccatgagtggaaatggggccatggcatttgatgtggaatatgcc 753
Query: 61 aggtggctagaggagcaaaatagacaaatcaatgagttgagatcagctgtcaattcccat 120
|||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||| |||
Sbjct: 754 cggtggctagaagagcaaaatcgacaaattaatgagctgagatcagctgtcaattctcat 813
Query: 121 gcgggtgacgccgaacttcgaattatcatagatggtataatggctcattatgatgaaatt 180
|||||||| || |||||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct: 814 gcgggtgatgctgaacttcgcattatcattgatggtgtaatggctcattatgatgaaatt 873
Query: 181 ttcaggctgaagagcaatgcagccaaggctgatgttttccatttgctgtctggcatgtgg 240
|||||| ||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 874 ttcaggttgaagagtaatgcagccaaggctgatgtgttccatttgctctctgggatgtgg 933
Query: 241 aagacacctgctgagaggtgtttcttgtggcttggtggcttccgttcatcagagcttctg 300
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 934 aagacacctgccgagaggtgtttcttgtggcttggtggtttccgttcatctgagctcctc 993
Query: 301 aagcttcttgtgaatcaattggagcccttgactgagcagcagttggtgggcataggtaat 360
|||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||
Sbjct: 994 aagcttcttgtgaaccaattggagcctttgactgagcagcagttggtgggccttggtaat 1053
Query: 361 ttgcagcaatcttcccaacaggcagaagatgctttatctcaaggaatggaggcattgcag 420
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1054 ttacagcaatcttcccaacaggccgaagatgctttatctcaaggaatggaggcattgcag 1113
Query: 421 cagtctctggctgagacattatctagtggatcccttggttcatccggttcatctggaaat 480
||||| |||||||||||| | ||||||||||| || ||||| || |||||||||||||||
Sbjct: 1114 cagtcactggctgagacactgtctagtggatctctaggttcttcaggttcatctggaaat 1173
Query: 481 gtggcaaattacatgggtcagatggccatggccatgggcaagctagggactctcgagggg 540
|||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 1174 gtggcaaattacatgggtcagatggctatggccatgggaaagctagggacccttgagggg 1233
Query: 541 ttcattcg 548
||||||||
Sbjct: 1234 ttcattcg 1241
>28883.m000741 Transcription factor HBP-1b(c1), putative
Length = 1431
Score = 115 bits (58), Expect = 3e-25
Identities = 211/262 (80%)
Strand = Plus / Plus
Query: 158 taatggctcattatgatgaaattttcaggctgaagagcaatgcagccaaggctgatgttt 217
||||||| |||||||||||||||||| |||| || |||| || | |||| |||||| |
Sbjct: 893 taatggcacattatgatgaaattttccggctaaaaagcattggcacaaaggttgatgtat 952
Query: 218 tccatttgctgtctggcatgtggaagacacctgctgagaggtgtttcttgtggcttggtg 277
| || |||| || |||||||||||||||||||||||||| |||||| ||||| | ||||
Sbjct: 953 ttcacatgctttcaggcatgtggaagacacctgctgagagatgtttcatgtggttgggtg 1012
Query: 278 gcttccgttcatcagagcttctgaagcttcttgtgaatcaattggagcccttgactgagc 337
| || | || || ||||| || ||| | |||| ||| || | || || ||||| || |
Sbjct: 1013 gatttagatcttctgagctgcttaagatacttgggaaccatcttgaaccattgacagatc 1072
Query: 338 agcagttggtgggcataggtaatttgcagcaatcttcccaacaggcagaagatgctttat 397
| ||||| |||||||| | ||| ||||||| |||||||||||||| |||||||| || |
Sbjct: 1073 aacagttaatgggcatatgcaatctgcagcagtcttcccaacaggctgaagatgccttgt 1132
Query: 398 ctcaaggaatggaggcattgca 419
||||||||||||| || |||||
Sbjct: 1133 ctcaaggaatggaagctttgca 1154