Jatropha Genome Database
- JcCB0153301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0153301.10 + phase: 0 /partial
(1638 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003713 Auxin response factor, putative 1223 0.0
30170.m014161 Auxin response factor, putative 56 7e-07
>29739.m003713 Auxin response factor, putative
Length = 3360
Score = 1223 bits (617), Expect = 0.0
Identities = 1082/1235 (87%), Gaps = 9/1235 (0%)
Strand = Plus / Plus
Query: 406 ttgctttccccttcaagctcacctttgcaacctcaattgataca---acagcagacccat 462
|||||||||||| |||||||||| ||||| ||||| ||||||| |||||||| ||
Sbjct: 2122 ttgctttcccctacaagctcaccattgcagcctcagatgatacagcaacagcagatgcac 2181
Query: 463 caacaaaacctgcagttccagcagtcaactatttcacagagccagcagcaaccactcggt 522
|||||||||| |||||| || |||||| | |||||||| |||||||||||| | |
Sbjct: 2182 caacaaaaccagcagtttcaccagtcaccactttcacagtctcagcagcaaccaataagc 2241
Query: 523 agcaacagcttctcaacggcagcactcatgcaatcacaatcttttcctgtcagccagcac 582
|| |||||||||||||| || || || |||||||||||||||||||| || ||||||| |
Sbjct: 2242 agtaacagcttctcaacagctgctcttatgcaatcacaatcttttccagtgagccagccc 2301
Query: 583 catgcccttcagaaatctccaacaat---tagagctcattccactcttacagatggagat 639
|| | ||| ||||| || || ||||| |||| | || || ||||||||||||||||||
Sbjct: 2302 caaggcctgcagaagtcacctacaataattagaccccactcaactcttacagatggagat 2361
Query: 640 gctccatcttgttcaacctcaccatccactaataattgccagattgcaccatcaaatttc 699
|||||||||||||||||||| || ||||||||||||||||||||| | || |||||||||
Sbjct: 2362 gctccatcttgttcaacctctccctccactaataattgccagatttctccttcaaatttc 2421
Query: 700 ctgaacagaaaccaacaagcacctgctatattgatgggggattcagtgattgagcctgca 759
|||||||||||||||||||| || || || ||||| | || |||||| |||||||||||
Sbjct: 2422 ctgaacagaaaccaacaagctccagcattaatgatgagtgactcagtggttgagcctgca 2481
Query: 760 acaaatcttgttcaagagctcaataacaagtctgatattcgggttaagcatgagtttcct 819
|| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 2482 acgaatctggttcaagagctcaatggcaagtctgatattcgggttaaacatgagtttccg 2541
Query: 820 ggttcaaaagcatcagaccaactaaaatacaaaggtacaataacagatcaattggaagcc 879
|||||||||| | || || ||||||||||||||||||| || |||||||||||||||
Sbjct: 2542 ggttcaaaaggggctgatcagttaaaatacaaaggtacaatgactgatcaattggaagcc 2601
Query: 880 tcctcgtctgggacatcatattgtctcgatgctggaaacatccagcaaaatttctcactc 939
||||| ||||| ||||||||||| || |||||||| || |||||||||||||||||| ||
Sbjct: 2602 tcctcttctggaacatcatattgcctggatgctggcaatatccagcaaaatttctcaatc 2661
Query: 940 cccacctttggtttggatggtgatgtccaatcacatcctcggaacagtctgccttttgca 999
|||||||||||| |||||| |||||||||| ||||| || ||||||||||| ||||||
Sbjct: 2662 cccacctttggtctggatg---atgtccaatcgcatccccgaaacagtctgccctttgca 2718
Query: 1000 actaatattgagagcttggcgcctgatactttgttgacaaggggatatgactctcaaaaa 1059
| ||||||||| ||||| || ||||| ||||| ||| | |||||||| |||||||| |||
Sbjct: 2719 aataatattgatagcttagcacctgacactttattgtctaggggatacgactctcagaaa 2778
Query: 1060 gatcttcaaaacttgctagctaattatggtgggactccaagagatattgagacagaattg 1119
||||||||||||||||| ||||||||||||| || ||||| ||||||||||| |||||
Sbjct: 2779 gatcttcaaaacttgctgtctaattatggtggcacaccaagggatattgagacggaatta 2838
Query: 1120 tccactgctgcaataagctctcagtcatttggggtgccaatcatgcccttcaagcctgga 1179
||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||
Sbjct: 2839 tccactgctgcaataagctctcagtcattcggggtgccaaacatacccttcaagcctgga 2898
Query: 1180 tgttcaaatgatgttgcaatcaatgactctggggttttgaatggtggattgtgggccaat 1239
|| || |||||||| || |||||||| ||||| ||||||||||| ||| | |||||||||
Sbjct: 2899 tgctctaatgatgtcgccatcaatgattctggagttttgaatggaggactttgggccaat 2958
Query: 1240 cagactcaacgcatgcgaacatatacaaaggttcaaaagcgtggctcagtgggcaggtct 1299
|| |||||||||||||||||||||||||||||||||||||||||||| || || || |||
Sbjct: 2959 caaactcaacgcatgcgaacatatacaaaggttcaaaagcgtggctctgtaggaagatct 3018
Query: 1300 attgatgtcacccggtataaagggtatgatgaacttaggcatgacctagctcgcatgttt 1359
|||||||| ||||| ||||||||||||||||| ||||| ||||| || || || ||||||
Sbjct: 3019 attgatgttacccgttataaagggtatgatgagcttagacatgatcttgcccgaatgttt 3078
Query: 1360 ggaattgaagggcaactagaagatccacaaagttctgactggaagttagtttatgtggat 1419
|| |||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 3079 ggcattgaaggacaactagaagatccgcaaagttctgattggaaattagtttatgtggat 3138
Query: 1420 cacgaaaacgacatactacttgttggcgatgacccttgggaggaatttgttagctgtgtt 1479
|| |||||||| ||||||||||||||||| || || |||||||| ||||| |||||||||
Sbjct: 3139 catgaaaacgatatactacttgttggcgacgatccgtgggaggagtttgtaagctgtgtt 3198
Query: 1480 cagagcataaagatcttgtcatctgccgaagtgcaacaaatgagtttagatggtgatctt 1539
|||||||||||||| ||||||||||| ||||| || || ||||||||||| |||||||||
Sbjct: 3199 cagagcataaagatattgtcatctgctgaagtccagcagatgagtttagacggtgatctt 3258
Query: 1540 ggtagtatgccagttccaaatcaagcatgcagtgggactgacagcggaaatgcatggaga 1599
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3259 ggtagtgtgccagttccaaatcaagcttgcagtgggactgacagcggaaatgcatggaga 3318
Query: 1600 ggacactatgatgataactcagctgcctcatttaa 1634
|| ||||||||||||||||| ||||||||||||||
Sbjct: 3319 gggcactatgatgataactcggctgcctcatttaa 3353
Score = 272 bits (137), Expect = 6e-72
Identities = 316/377 (83%), Gaps = 9/377 (2%)
Strand = Plus / Plus
Query: 1 aatggtgtggttacctctaaccaaattccaaatcaaaatttgcagcaaccaattgtatac 60
||||||||| || || ||||||||||||||||||| | | ||||||||||||||||||||
Sbjct: 1720 aatggtgtgattgcccctaaccaaattccaaatcagagtatgcagcaaccaattgtatac 1779
Query: 61 tctcagctgcagc---------agcagcagctactggcaagtaataaccaatcccagaac 111
|||||||| |||| |||||||||||||| |||| |||| |||||| || ||
Sbjct: 1780 tctcagcttcagcagcaacagcagcagcagctactgacaagcaatacccaatcacaaaat 1839
Query: 112 attccatctgctaataagaactcatatccactgacctctttgccacaagacccccagttc 171
||||| |||||| |||| ||||||| ||||| |||||||||||||| | ||||||
Sbjct: 1840 attcctgctgctactaagggttcatatcagctgacttctttgccacaagagacacagttc 1899
Query: 172 cagcaacaaatggagcagcaatctaacctcttacagagacaccagcagcagacacagctg 231
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 1900 cagcaacaaatggagcagcaatctaaccttacacagagacaccagcagcagacacaattg 1959
Query: 232 caacagtctcccctgcagttgttgcaccaaaatctgtcacagagggcacagccacaatca 291
|||||||| || ||||| || ||||| ||||| |||||||| | |||||||||||| ||
Sbjct: 1960 caacagtccccgctgcaattattgcaacaaaacctgtcacatcgagcacagccacaaaca 2019
Query: 292 cagtcacagccacaagcgcaacaactgtcgcagcctggcctctcagatcaacagcttcac 351
|| |||||| |||| | |||||| | |||||||||||||| || ||||||||||||
Sbjct: 2020 caaccacagcatcaagtaccacaactaccacagcctggcctctctgagcaacagcttcac 2079
Query: 352 ttgcagttgctgcagaa 368
|||||||||||||||||
Sbjct: 2080 ttgcagttgctgcagaa 2096
>30170.m014161 Auxin response factor, putative
Length = 2853
Score = 56.0 bits (28), Expect = 7e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1435 ctacttgttggcgatgacccttgggaggaatttgttagctgtgt 1478
|||||| |||| ||||| |||||||||||||||||| |||||||
Sbjct: 2686 ctacttattggagatgatccttgggaggaatttgttggctgtgt 2729