Jatropha Genome Database

JcCB0152261.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0152261.10 - phase: 0 /partial
         (522 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006983 conserved hypothetical protein                          287   3e-77

>30131.m006983 conserved hypothetical protein
          Length = 2241

 Score =  287 bits (145), Expect = 3e-77
 Identities = 432/523 (82%), Gaps = 6/523 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    cattcatggatgagatcaagaagcgtgagaagcagaggaagaaactggcccaaaaggaac 60
            |||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||| |
Sbjct: 1721 cattcatggatgagattaagaagcgtgagaagcagaggaaggaacttgccaaaaaggagc 1780

                                                                        
Query: 61   gaaaaagagaagatcaaggccgaagctgcatctgcacattct-atgccaggtttatccag 119
            | ||  |||||||||||||| ||||||||   ||| ||| || || |||  ||||||  |
Sbjct: 1781 ggaag-gagaagatcaaggcagaagctgc---tgcccatcctgattccat-tttatctgg 1835

                                                                        
Query: 120  tattggacgctccttttgcgatgactcccctaaattttctatggatgactttgaagctct 179
            |  ||||| ||||||   | ||||||| ||||||||||| |||||||| |||||||| ||
Sbjct: 1836 ttctggacactccttcctcaatgactctcctaaattttccatggatgattttgaagccct 1895

                                                                        
Query: 180  tggaagttccacggcaatgtcatcaagccctccaatgtcttcaagtcctccagttgttgg 239
            |||||||||||| |||||| |||| ||||| |||||||| ||||| ||||||||||||||
Sbjct: 1896 tggaagttccactgcaatgccatctagccccccaatgtcatcaagccctccagttgttgg 1955

                                                                        
Query: 240  ggagagattactgttctcaaatgtcacacggcttggttttgctgctggccatggttcacc 299
            |||||   ||||||| || ||||| ||| |||||||||||||||||||||| | ||| ||
Sbjct: 1956 ggagaagatactgttttcgaatgttacaaggcttggttttgctgctggccacgattctcc 2015

                                                                        
Query: 300  ggccttgagaactgaggaaaccagtgctttgcataacaacaaagtgacaaatgattcttc 359
              |||||| || |||||||||||| ||| |||||| |||||||||||||||||||||| |
Sbjct: 2016 caccttgaaaattgaggaaaccagcgctctgcatagcaacaaagtgacaaatgattctac 2075

                                                                        
Query: 360  aagtgtatccggtacaaaaaattcaggcacaccatcatttgccaatgtaatatctagagt 419
              ||||||| || || | |||| |||| |||||| ||||||| ||| |||  || ||| |
Sbjct: 2076 tggtgtatctgggacgagaaatacaggtacaccaacatttgcgaatataacctcaagaat 2135

                                                                        
Query: 420  gaagtcaggagaagctctggatgcacccaagacaaatgaaattggaaagaaaggaaagaa 479
            ||| || ||||||  | || ||| | | ||||  ||||| ||||||||||||||||||||
Sbjct: 2136 gaattctggagaaaatttgaatgtatctaagatgaatgagattggaaagaaaggaaagaa 2195

                                                       
Query: 480  atcgagtcgagtccttttgtcaactgcaggtggtcgacgctac 522
            |  || |||||||||  |||| || ||||||||| | ||||||
Sbjct: 2196 acagaatcgagtcctcatgtccacagcaggtggtaggcgctac 2238