Jatropha Genome Database
- JcCB0152181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0152181.10 - phase: 1 /pseudo/partial
(908 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004629 grr1, plant, putative 636 0.0
28320.m001145 grr1, plant, putative 52 6e-06
>29848.m004629 grr1, plant, putative
Length = 1956
Score = 636 bits (321), Expect = 0.0
Identities = 765/909 (84%), Gaps = 3/909 (0%)
Strand = Plus / Plus
Query: 1 ggtaatggtcatggcttgcagaagttgaagtcgtttgcagttacatcatgc-gaggggtg 59
||||| ||||||||||| ||||||||||| || || ||||||| |||||| | || |||
Sbjct: 1045 ggtaagggtcatggcttacagaagttgaaatccttcacagttacgtcatgccgtggagtg 1104
Query: 60 acagatgctgggattgaagctatgggaa-gggttgcccaaacttaaggcacttttgcctt 118
|||||||||||| ||||||| | |||| ||||||||| || ||||||| || ||||||
Sbjct: 1105 acagatgctgggcttgaagccgtaggaaagggttgcccgaatctaaggcagttctgcctt 1164
Query: 119 cggaaatgcgtattcttatccgacaatgggactggtctcatttgtaaaagctgcacaatc 178
|| |||||| |||||||| ||||||||| |||||||||||||||||||||||| |||
Sbjct: 1165 cgcaaatgcaccttcttatctgacaatggg-ctggtctcatttgtaaaagctgcaggatc 1223
Query: 179 actggaggtcctgcagttggaggagtgccacaggatcgcccaacttgggttttttggttc 238
||||||| |||||| || |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1224 actggagagcctgcaattagaggagtgccacaggatcacccaacttgggttttttggttc 1283
Query: 239 ccttttgaactctggttcaaaattgaaggccctttctttggtaaactgcatgggcattag 298
| ||||||||| |||| ||||||||||||| ||| | ||||||||||| |||| |||||
Sbjct: 1284 cattttgaactgtggtgcaaaattgaaggctcttgccctggtaaactgcttgggaattag 1343
Query: 299 agaactaaatctgcgattacctcaggtgcctccttgcaattccctgcgttcattgtccat 358
||| |||||||| ||| ||||||| | ||||||| | || ||||| |||||| |||
Sbjct: 1344 agacctaaatctaggatcacctcagctatctccttgtgaatcactgcgatcattgatcat 1403
Query: 359 ccgtaactgcccaggtttcggtgatggcggcttggctctgttgggtaagttgtgccccca 418
||||||||||||||||| ||||||| | | |||| ||||| ||||||||||| ||
Sbjct: 1404 acgtaactgcccaggttttggtgatgcgagtctctctcttttggggaagttgtgccctca 1463
Query: 419 attgcagaatttggaattgagtggacttcacggagtgactgatgctgggtttatcccatt 478
||| ||| || ||||||||||||| ||||| ||||| |||||||||||| ||||||||||
Sbjct: 1464 attacagcatgtggaattgagtgggcttcagggagtaactgatgctgggcttatcccatt 1523
Query: 479 gctggagaactgtgaggctggtttggtgaaggttaatcttagtggctgtgtgaatttaac 538
|| || | ||| | ||||||| |||||||||| ||||||||||| ||| ||||||| |
Sbjct: 1524 acttgatagctgcggggctggtatggtgaaggtcaatcttagtggttgtctgaatttgtc 1583
Query: 539 tgacaaagtggtttcagcattgactgagcagcatggttggactcttgaggttctgaatct 598
|||||||| || |||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 1584 tgacaaagctgtgtcagcattaactgagcagcatggttggactcttgaagtgctgaatct 1643
Query: 599 tgatggatgtggaaaaattactgatgaaagtttgactgcaattgctgagaactgcttaat 658
||| ||||||| ||||||||||||| |||||| |||||||||| ||||||||||| |
Sbjct: 1644 tgaaggatgtgagaaaattactgatgctagtttggctgcaattgcagagaactgcttctt 1703
Query: 659 gctcagtgatcttgatgtctcgaaatgtgctatctcagattctgggctcatggttctggc 718
||| ||||| ||||||||||| ||| | || || || ||||||||||| ||||| |||||
Sbjct: 1704 gcttagtgagcttgatgtctcaaaaagcgcgatttccgattctgggcttatggtcctggc 1763
Query: 719 tcgttcaaaccagctcaatttgcagatcttttcggttgcaggttgctctatgatatcaga 778
||||||||| ||||| ||| | ||||||||||| | | |||||||| |||||||||||
Sbjct: 1764 tcgttcaaagcagcttaatctacagatcttttcagcatctggttgctcaatgatatcaga 1823
Query: 779 taagagcttacctgccattgtaaaaatgggtcatactcttttagggttgaatattcagca 838
| ||| ||||||||| |||||||| |||| || || || | || |||||| |||||||
Sbjct: 1824 caggagtttacctgcccttgtaaaactgggccagaccctcctgggattgaatcttcagca 1883
Query: 839 ctgcaatgccattagcagcagcactgttgaccttctcgtggagcgtttgtggaggtgtga 898
|||||||||||| |||| |||| || | || || || ||||||||||| |||||||||||
Sbjct: 1884 ctgcaatgccatcagcaccagcgctatcgatctacttgtggagcgtttatggaggtgtga 1943
Query: 899 tatcctttc 907
|||||||||
Sbjct: 1944 tatcctttc 1952
>28320.m001145 grr1, plant, putative
Length = 1947
Score = 52.0 bits (26), Expect = 6e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 507 aaggttaatcttagtggctgtgtgaatttaactgacaaagtggtttcagc 556
|||||||||||||||||||| ||||||| ||||| ||||| |||||||
Sbjct: 1543 aaggttaatcttagtggctgcatgaatttgactgatgaagtgatttcagc 1592