Jatropha Genome Database

JcCB0151131.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0151131.10 + phase: 0 /partial
         (382 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27810.m000636 conserved hypothetical protein                          218   2e-56

>27810.m000636 conserved hypothetical protein
          Length = 3165

 Score =  218 bits (110), Expect = 2e-56
 Identities = 311/378 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    gttgatgccagaatggtctaaaagtgttcaagactggaactccatgattggaccattgat 62
            |||||||||||| |||| ||||| ||||||| ||||||||||||||||   ||  ||| |
Sbjct: 1770 gttgatgccagagtggtgtaaaaatgttcaaaactggaactccatgatcatactgttgct 1829

                                                                        
Query: 63   tgacaagatgtttgctgaaccatcaaatgcaactattgtacggtttttgagttatataag 122
            ||| |||||||||||||| ||  |||||||||  ||||||  ||||||||||||||||||
Sbjct: 1830 tgataagatgtttgctgagcctgcaaatgcaataattgtaaagtttttgagttatataag 1889

                                                                        
Query: 123  tgagcacctagcggaagctgcagatgtagtacttcatcgagtcctattgcagatgcagtc 182
             || | |||||| ||||| ||||||||||||||  ||   |||||||  |||||| || |
Sbjct: 1890 cgaacgcctagcagaagcagcagatgtagtactctattatgtcctatcacagatgaagcc 1949

                                                                        
Query: 183  acagaaagggattaaaaaaggcctcttgtccagatgggagagtaaatcctgccaaaatga 242
            ||||||||| || ||  ||||  | ||||||| |||| |||||| ||||||| | || ||
Sbjct: 1950 acagaaaggaatcaatgaaggtttattgtccacatggaagagtagatcctgcaacaacga 2009

                                                                        
Query: 243  ggacttaatgggaatgcagcaatctttgtttgagcgcctttgtccattacttataattcg 302
            |||||| |||   ||||||||| | || |||||||| ||||||||||| ||||| |||||
Sbjct: 2010 ggacttgatgaagatgcagcaaacattatttgagcgtctttgtccattgcttattattcg 2069

                                                                        
Query: 303  gctgcttcctctgagagtttttaatgacctcaattcatttattatgtatggtcaacttcc 362
             |||||||| ||||||||||||||||||||  | || | || ||||||||||||||||||
Sbjct: 2070 actgcttccactgagagtttttaatgaccttgaatcctctactatgtatggtcaacttcc 2129

                              
Query: 363  cgtccaaggcattactca 380
            |   |||| |||||||||
Sbjct: 2130 cagtcaagtcattactca 2147