Jatropha Genome Database
- JcCB0149161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0149161.10 + phase: 0 /pseudo/partial
(678 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29908.m006268 DNA binding protein, putative 353 9e-97
>29908.m006268 DNA binding protein, putative
Length = 1827
Score = 353 bits (178), Expect = 9e-97
Identities = 545/668 (81%), Gaps = 17/668 (2%)
Strand = Plus / Plus
Query: 28 aaaggtatacagcgaatacagtgctggctttgcttcaagaagtagctcaattcgaaggag 87
||||||||||||| |||||||| |||| || || |||||||||||||| ||||||||||
Sbjct: 74 aaaggtatacagcaaatacagtattggcattactacaagaagtagctcagttcgaaggag 133
Query: 88 tgaagattgattggaatgagcttgtgaagaagacaacgacagggatttctaatgtgagag 147
|||||||||||||||||| ||||| || |||||||| ||||||||| ||||||||||
Sbjct: 134 tgaagattgattggaatgcccttgttaaaaagacaacaacagggattaagaatgtgagag 193
Query: 148 agtatcagatgctatggagacatttggcctatcgacacgccctgctagataaattgcacg 207
| ||||| ||| ||||||| || ||||||||| ||| | || | ||||| ||| | |
Sbjct: 194 aatatcaaatgttatggaggcacttggcctataaacatactttgattgataatttggatg 253
Query: 208 acggagctcaacctctg-----------tgatttggaatatgaattagatgtttttccgg 256
| |||||||| |||||| ||||||||| |||||||| || | |||||||
Sbjct: 254 atggagctcagcctctggatgatgatagtgatttggagtatgaattggaagcatttccgg 313
Query: 257 atgttagcactgaagcttcaacggaggctgcagcttgtgtcaaggtcctgattgcttctg 316
||||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct: 314 atgttagcagtgaagcttcggccgaggctgcagcttgtgtcaaggtcctgattgcatctg 373
Query: 317 gtttaccgagtgactcgacccatccaaatagcacaacagttgaggctcctttaaccataa 376
|| | | |||||||| ||||| ||||||||| | ||||| |||||||||||||| ||||
Sbjct: 374 gtgcaacaagtgactccacccacccaaatagcgctacagtcgaggctcctttaacaataa 433
Query: 377 atataccaaatgggaagccatgtagattcacatcagaaaatttgcaacctgctattatga 436
||||||| |||||| || || ||| | |||||| |||| |||||||||| |||
Sbjct: 434 atatacctaatgggcagtcagccagagctatatcagagaattcacaacctgctaccatgc 493
Query: 437 agggggtgaatattacagttccagtttctgttcagaaacagcctttgcctgcagtaacat 496
||| |||||||||||||||| |||||| ||||||||||||| |||| |||| |||
Sbjct: 494 gagggatgaatattacagttcctgtttctattcagaaacagcccctgcccacagtggcat 553
Query: 497 ctgctgaaggattggatgcaaatggatctggaagtgg----agtgc--cacgaaggaaaa 550
| |||||| || |||| ||||||| |||| ||| | | | ||||||||||||
Sbjct: 554 ccactgaagtgtttgatgggaatggattaggaaatggcaatattcctccacgaaggaaaa 613
Query: 551 gaaagccatggtcagactctgaggatctggaactaattgctgctgtgcagaaatatggtg 610
|||| ||||||||||| | |||||| ||||| |||||||||||||||||||||||||||
Sbjct: 614 gaaaaccatggtcagaagcagaggatttggaattaattgctgctgtgcagaaatatggtg 673
Query: 611 aagggaattgggcaaatatcttaagaagtgaagtcaagtgggatagaactgcttcacagc 670
|||| |||||||||||||||||| | || ||| ||| ||||| ||||||||||||||||
Sbjct: 674 aaggaaattgggcaaatatcttacggagcgaattcacatgggacagaactgcttcacagc 733
Query: 671 tatctcag 678
||||||||
Sbjct: 734 tatctcag 741