Jatropha Genome Database

JcCB0148821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0148821.10 - phase: 0 /partial
         (548 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29904.m002981 hypothetical protein                                    359   1e-98

>29904.m002981 hypothetical protein
          Length = 2376

 Score =  359 bits (181), Expect = 1e-98
 Identities = 414/493 (83%), Gaps = 9/493 (1%)
 Strand = Plus / Plus

                                                                        
Query: 17   tgcatgcaaatagacagccccagccgcggtctttccataacccttcaaataggagagtag 76
            ||||| |||||| |||||| ||||| ||||| || || ||||| ||||||||||||| | 
Sbjct: 1754 tgcattcaaatacacagcctcagccacggtcatttcagaacccctcaaataggagaggaa 1813

                                                                        
Query: 77   cccaggctcgagttcctgctacaagaacatcacaattgaggagtcgcctgttcaaccgat 136
            ||||| ||||| |||||||||| ||||| ||||||||||||| |||| ||||||||||  
Sbjct: 1814 cccagtctcgacttcctgctactagaacttcacaattgaggaatcgcttgttcaaccggc 1873

                                                                        
Query: 137  ccccggcagcattatctagagctaggaatccctctcttgctacgttatctacagcaagga 196
            | || |||  ||||  |||||||||||| | ||| ||| || | | ||| ||| ||||||
Sbjct: 1874 ctcctgcaagattacttagagctaggaaccactcgcttacttcatcatccacaacaagga 1933

                                                                        
Query: 197  atttccagtttcctctgggcatggacatagatatgagacttgatatattggaggcattag 256
            |||||||||||||| || |||||||| |||| |||||||||||||||||||| |||||||
Sbjct: 1934 atttccagtttcctttgagcatggacttagagatgagacttgatatattggaagcattag 1993

                                                                        
Query: 257  aggaattcagtgatatgagtatgacgactagtcgcatccttcaagttcagcgcgatttca 316
            | ||         ||||||| |||| | |||||  || |||||||||||||| |||||||
Sbjct: 1994 aaga---------tatgagtgtgacaaatagtcatattcttcaagttcagcgtgatttca 2044

                                                                        
Query: 317  atgaaaatgattacgaaatgttgttggcacttgatgagaataatcaccaacgtggtgctt 376
            ||||||||||||| || ||||| ||||| ||||||||||| ||||| ||||  ||||| |
Sbjct: 2045 atgaaaatgattatgagatgttattggcccttgatgagaacaatcagcaacacggtgcat 2104

                                                                        
Query: 377  ctgtgaatcgaattaacagtttaccagagtctacagtgcagactgataactttgaagaaa 436
            |    ||||||||||||||||| |||||||||  | |||||||||| |||||||||||||
Sbjct: 2105 caaccaatcgaattaacagtttgccagagtctgtattgcagactgacaactttgaagaaa 2164

                                                                        
Query: 437  cttgtgcaatctgtctagaaaccccaactgttggagaaactatacgccatctcccttgct 496
            |||| |||||||||||||||||||||||| |||||||||||||||| ||||| || ||||
Sbjct: 2165 cttgcgcaatctgtctagaaaccccaactattggagaaactatacgtcatcttccgtgct 2224

                         
Query: 497  tgcataaatttca 509
            |||| ||||||||
Sbjct: 2225 tgcacaaatttca 2237