Jatropha Genome Database

JcCB0148531.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0148531.20 + phase: 0 
         (1053 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30143.m001199 conserved hypothetical protein                          165   7e-40

>30143.m001199 conserved hypothetical protein
          Length = 1014

 Score =  165 bits (83), Expect = 7e-40
 Identities = 320/399 (80%)
 Strand = Plus / Plus

                                                                       
Query: 109 ttccccaattatcaaaatatgctgaaatctttcagaatttacatttatacccccgcaaga 168
           ||||| ||||| ||||  |||||  ||||||||| ||| |||| |||||||||  ||  |
Sbjct: 106 ttccctaattaccaaagaatgctccaatctttcaaaatatacacttatacccctccacaa 165

                                                                       
Query: 169 cccttgtctttcgcctctccagttgaatctctgttcttctcttctcttcaaaacagtccc 228
           ||||| |||||| | |||||||||||||| || |||||| |||| || |||||||| |  
Sbjct: 166 cccttctctttcacttctccagttgaatcacttttcttcacttcactccaaaacagccat 225

                                                                       
Query: 229 tttgtagcccaaaacccagaagaagctcatctcttcttcgtgcccttcgcttctggtatc 288
           ||  || ||| |||||||||| ||||||| ||||||||| | || ||  |||||| | ||
Sbjct: 226 ttcataaccctaaacccagaacaagctcacctcttcttcatcccttttccttctgatctc 285

                                                                       
Query: 289 tccacgcgctcgattgctcatgtaattagagatcttcggatggatttcccctattggaat 348
           ||| |||| ||  | || | |||||| ||||| || || |  || || || || ||||||
Sbjct: 286 tccccgcgttctctcgcgcgtgtaatcagagacctccgaacagaatttccttactggaat 345

                                                                       
Query: 349 cgtactctcggtgccgatcatttctatgtttcatgttctggtctcggctacgaatcggac 408
           ||||| |||||||| |||||||| ||| |||| ||  | ||||||||||| |||||||||
Sbjct: 346 cgtacactcggtgcggatcatttttatatttcctgcaccggtctcggctatgaatcggac 405

                                                                       
Query: 409 cgaaatcttgtggagttgaagaaaaactcggttcagatttcctgctttccggcaccggaa 468
           |||||||| || ||||| ||||||||||| |||||||| || || |||||| | ||  | 
Sbjct: 406 cgaaatctcgttgagttaaagaaaaactcagttcagatctcgtgttttccgtctcctaac 465

                                                  
Query: 469 ggtaagtttgttccccacaaggacataacattgcctccg 507
           |||||||||||||| || ||||| |||||| ||||||||
Sbjct: 466 ggtaagtttgttcctcataaggatataacactgcctccg 504



 Score =  163 bits (82), Expect = 3e-39
 Identities = 136/154 (88%)
 Strand = Plus / Plus

                                                                        
Query: 894  aggtgatacatccgagggaatgaggaaattgggtgcggcagcgagtatgcatttagtatg 953
            ||||||||| |  ||| ||||||||| ||||||||||| |||||||  ||||||||| ||
Sbjct: 855  aggtgatacgtgtgagagaatgaggagattgggtgcgggagcgagtcagcatttagtttg 914

                                                                        
Query: 954  gaatgaaatgcctgagccgtacgattcgtttcatatggtgatgtatcagctttggcttag 1013
            |||||| |  ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 915  gaatgagactcctgagccgtacgatgcgtttcatatggtgatgtatcagctttggcttag 974

                                              
Query: 1014 acggcacgcaattagatacgcacgaagagaatgg 1047
             || ||| | |||||||||||||| |||||||||
Sbjct: 975  gcgtcacaccattagatacgcacggagagaatgg 1008