Jatropha Genome Database
- JcCB0148191.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0148191.10 - phase: 0 /partial
(1396 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014074 conserved hypothetical protein 361 7e-99
>30147.m014074 conserved hypothetical protein
Length = 3135
Score = 361 bits (182), Expect = 7e-99
Identities = 504/610 (82%), Gaps = 1/610 (0%)
Strand = Plus / Plus
Query: 753 tggcggtgacagagtgagattatcgaggcggccaaatggagaatactcgcctagagtgat 812
||||||||| |||||||||||||| |||||||||| ||||| | || || ||||| ||
Sbjct: 825 tggcggtgatagagtgagattatctcggcggccaaacggagatttttctccgagagtcat 884
Query: 813 ttctggaaaatttgccggtgaaacggagcgagtccatccctacgatctcgttgaaccaat 872
||||| ||||| ||||| ||| |||| |||||||||||||| |||||||||||
Sbjct: 885 atctggcaaattaaaaaatgaaaatgagagagttcatccctacgatctagttgaaccaat 944
Query: 873 gcagtatttgttcatcagaatagtgaaggcgcgtggtttatcgcaaaacgagagcccata 932
|||||||||||| | |||||||||||||| ||||||||||| | ||||| | ||||
Sbjct: 945 gcagtatttgtttacaagaatagtgaaggctcgtggtttatcaccgaacgatggtccatt 1004
Query: 933 cgtgaaaatcaggacttcgaatcattttgtcaaatctaaaccggcaatttaccggcctgg 992
|| || ||||| ||||| | ||||| ||| |||||||||||| || |||||||||||
Sbjct: 1005 tgtcaagatcagaacttctactcattctgtacgatctaaaccggcgatataccggcctgg 1064
Query: 993 tgagccaaccgattctcccgagtggcatcaagtgtttgctcttggtcacaacagacctga 1052
||||||||||||||||| || |||||||| |||||||| ||||||||||||| ||| ||
Sbjct: 1065 cgagccaaccgattctcctgaatggcatcaggtgtttgcacttggtcacaacaaaccaga 1124
Query: 1053 ctcagctagctcaactttagaaatttcggtttgggactcaccagagcagtttcttggagg 1112
||| | | || || |||||||| || |||||||||||| |||||||||||||||| ||
Sbjct: 1125 ctcgccctgttcgaccttagaaatctctgtttgggactcaacagagcagtttcttggcgg 1184
Query: 1113 cgtttgctttgatctctctgatgttcccgtgcgagacccaccagacagtcctttggctcc 1172
|||||| |||||||| || |||||||| || |||||||| || || ||||||||||||||
Sbjct: 1185 cgtttgttttgatctgtccgatgttccagttcgagacccgccggatagtcctttggctcc 1244
Query: 1173 tcaatggtaccgcctcgagagcagccctgatcaacattccggtagggtctccggcgacat 1232
||||||||| || | |||||| | |||||||| |||| |||| || || || || ||
Sbjct: 1245 tcaatggtatcggttagagagcggtcctgatcagaattcgagtagagtgtctggtgatat 1304
Query: 1233 ccagctctccgtttggatcggaactcaaaacgacgatgcttttccggaggcctggagctc 1292
||||| || |||||||| ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1305 tcagctttctgtttggattggaactcaaaacgacgacgcttttccggaggcttggagctc 1364
Query: 1293 tgacgcgccttatgtggctcaacactcgctcaaaggtttaccagtccccaaaactctggt 1352
||| || || || || || | ||||||| |||||||| || ||||| |||||||| ||||
Sbjct: 1365 tgatgcaccgtacgttgcgc-acactcgttcaaaggtctatcagtcaccaaaactttggt 1423
Query: 1353 atttaagagt 1362
|||| |||||
Sbjct: 1424 atttgagagt 1433
Score = 242 bits (122), Expect = 5e-63
Identities = 293/350 (83%)
Strand = Plus / Plus
Query: 55 gtagtcaatgcacgtgatcttcttcccaaggatggccagggaagctccagcccttacgtc 114
|||| |||||||||||| |||||||| || || ||||| ||||||||||| ||||| |||
Sbjct: 61 gtagccaatgcacgtgaccttcttcctaaagacggccaaggaagctccagtccttatgtc 120
Query: 115 atcgttgattttgatggccagaagaaacgaacctccaccaggtaccgggaactcaatcct 174
|||| ||| |||||||||||||| || || || ||||| | ||||| || ||||||||
Sbjct: 121 atcgctgaatttgatggccagaaaaagcgcacttccactaaataccgcgacctcaatcca 180
Query: 175 gaatggaacgaaattctcgagtttactgtctctgacccggataatatggaattcgaggag 234
||||||||||| | |||||||| | |||||| || || ||||||||||| | || |||
Sbjct: 181 gaatggaacgagacgctcgagttcattgtctccgatcctgataatatggaggttgaagag 240
Query: 235 ctagaaattgaggtctttaatgataagaagtacggcaatggcagtggccggaaaaatcac 294
|| |||||||| ||||| ||||||||||||| |||||||||||||||||| ||||| |||
Sbjct: 241 cttgaaattgaagtcttcaatgataagaagttcggcaatggcagtggccgtaaaaaccac 300
Query: 295 ttccttggtagggtaaaattgtacggttctcagtttgctaaaagaggagaagaaggtctc 354
||| | || ||||||||| |||| ||| |||||||||||| |||||| |||||| ||
Sbjct: 301 ttcttaggaagggtaaaagtgtatggtactcagtttgctaggagaggacaagaagcactt 360
Query: 355 atttattttcctctcgagaagaaaagtgtttttagctggatcagaggtga 404
|| ||||| ||||| ||||| |||||||| ||||||||||| |||||||
Sbjct: 361 atctatttccctcttgagaaaaaaagtgtctttagctggattcgaggtga 410