Jatropha Genome Database
- JcCB0147481.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0147481.10 + phase: 0 /partial
(783 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28693.m000103 Pre-rRNA-processing protein ESF1, putative 640 0.0
>28693.m000103 Pre-rRNA-processing protein ESF1, putative
Length = 2169
Score = 640 bits (323), Expect = 0.0
Identities = 675/792 (85%), Gaps = 9/792 (1%)
Strand = Plus / Plus
Query: 1 gctggtgacttgtatgtggtattatcctcatttcttccaaaaagaggagctattaagtcg 60
|||| |||||||||||| ||||| |||||||||||||||| | |||| ||| |||
Sbjct: 607 gctgttgacttgtatgtagtattgcgctcatttcttccaaaaggtggagacattttgtct 666
Query: 61 gtggctgtctatccatctgaatttggtctagagcgtatgaaagaggaagaacttcatggc 120
|||||||||||||||||||||||||||||| | |||||| | ||||||||||||||||||
Sbjct: 667 gtggctgtctatccatctgaatttggtctacaacgtatggaggaggaagaacttcatggc 726
Query: 121 cctgttggcttatttgacaatgagaatgagaaaaaagatgatgac--------agtggt- 171
||||||||||||||||| ||||||| |||| || ||||| ||| || |
Sbjct: 727 cctgttggcttatttgatgatgagaaaaagaagaatgatgaagacgaagacgaagacgaa 786
Query: 172 gatgatgagattgatgaggagaagttgcgtgcttacgagaaaagtaggctgaggtatttc 231
|||||||| ||||| || ||||| ||||||||||| |||||||||||||||||||| | |
Sbjct: 787 gatgatgaaattgacgaagagaaattgcgtgcttatgagaaaagtaggctgaggtactac 846
Query: 232 tatgctgtagtggaatgtgattctattgcaacagcagaacacttgtacaaagcttgcgat 291
|||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||
Sbjct: 847 tatgctgtagtggaatgtgattctgttgcaacagcagaacatctttacaaagcttgtgat 906
Query: 292 ggagttgagtttgaaagatcttccaatgtgcttgatcttagatttgtgcccgactctatg 351
|||||||||||||||||||| ||||||||| | |||||||||||||| |||||||| |||
Sbjct: 907 ggagttgagtttgaaagatcatccaatgtgttcgatcttagatttgttcccgactcaatg 966
Query: 352 gaatttaaacatccgcctcgtgacattgctgaagaggcacccacgaattatgatggattg 411
|||||||| ||||| |||||||| |||||| | |||||||| || | ||||| |||||
Sbjct: 967 gaatttaagcatccacctcgtgatattgctaaggaggcacctacaagctatgaaggatta 1026
Query: 412 gacttccataccaaagcactgcagcacagtaatattgctatttcttgggatgaagatgaa 471
|| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct: 1027 gatttccataccaaagcactgcaacacagtaacattcctatttcttgggatgaagatgaa 1086
Query: 472 ccacaacgtgtaaagaccttgaaacgaaaatttaatgctgatcagctggctgatttggag 531
||||| |||||||||||||| ||||||||||||| ||| |||||||||||||| |||||
Sbjct: 1087 ccacagcgtgtaaagaccttaaaacgaaaatttactgcagatcagctggctgaaatggag 1146
Query: 532 ttgaaggagttcttagcttctgatgagagtgaaagtgatgaagatgaaaatgatgatgtt 591
||| |||| || ||||||||||||| ||||||||| ||||| |||| |||||||| |
Sbjct: 1147 ttgcaggaatttttagcttctgatgggagtgaaagcgatgatgatgggaatgatgacaat 1206
Query: 592 gcagagggtgaagtggataagaagattaaaaaacgagataaatatcgtgctttaatcgag 651
||||| ||||||| ||||| ||| |||||| | ||||| |||||||||||||| ||
Sbjct: 1207 gcagaaggtgaagcggatagaaaggagaaaaaaagggataagtatcgtgctttaattcag 1266
Query: 652 gctggtgatggttcagatggggaaaatgaagaggaaggccaggatatggaaattactttt 711
||||||||||||||||||| || |||| || |||||||| || ||||| |||||||||
Sbjct: 1267 tctggtgatggttcagatggagaggatgaggaagaaggccaagagatggagattactttt 1326
Query: 712 cacactggcttagaaggtttaagcaagcgtcttctggaaagaaaggataagaaatcagaa 771
|||||||||| || |||||||||||||| | || |||| || |||||||||||| |||
Sbjct: 1327 aacactggcttggagggtttaagcaagcgaatcctagaaaaaagggataagaaatctgaa 1386
Query: 772 agcgtttgggaa 783
| |||||||||
Sbjct: 1387 actgtttgggaa 1398