Jatropha Genome Database

JcCB0143591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0143591.10 - phase: 0 /partial
         (691 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29713.m000177 acyl-CoA oxidase, putative                              315   2e-85

>29713.m000177 acyl-CoA oxidase, putative
          Length = 759

 Score =  315 bits (159), Expect = 2e-85
 Identities = 342/403 (84%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggtgaatactgataaactgtcgctatacatgagagggaaacatagggagatacaggagaa 248
           ||||||||  || ||||||||  | |||||||||||||| |||||||||||||| || ||
Sbjct: 204 ggtgaataaagagaaactgtctttgtacatgagagggaagcatagggagatacaagaaaa 263

                                                                       
Query: 249 ggtgtttgcttactttaattcaaggccggagttgcagaccccagtagagatagctaaaga 308
           ||| ||||| |||||||| |||||||| |||||||| || ||||| |||||| | | | |
Sbjct: 264 ggtttttgcgtactttaaatcaaggccagagttgcaaactccagtggagatatcaagaaa 323

                                                                       
Query: 309 tgactatagggagctttgttggagacagctactgggtttggttagagaggctggaattag 368
           |||  |||| |||||||| ||||||||| || ||||||| || |||||||||||||||||
Sbjct: 324 tgaacatagagagctttgctggagacagttattgggtttagtcagagaggctggaattag 383

                                                                       
Query: 369 gccttttagatatgtagcagatgatcctgttaagtattttgccattcttgaggcggttgg 428
           |||| |||  ||  || |||| ||||||| ||  |||||||| |||||||| || | |||
Sbjct: 384 gcctcttaagtacatatcagaagatcctgctatttattttgctattcttgaagctgctgg 443

                                                                       
Query: 429 tagcgtggatatgtcgcttggaatcaaaatgggtgtccagtacagtctctggggaggctc 488
            || |||||||| || ||||| ||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 444 gagtgtggatatttctcttgggatcaagatgggtgttcagtatagtctttggggagggtc 503

                                                                       
Query: 489 tgttatcaacttaggaactaaaaagcatagggaaaagtactttgatggtattgacaattt 548
           | | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 tataatcaacataggaactaaaaagcatagggataagtactttgatggtattgacaattt 563

                                                      
Query: 549 ggaatacccaggttgttttgctatgacagagctacatcatggt 591
           ||| ||||| || |||||||||||||| ||| |||||||||||
Sbjct: 564 ggactacccgggatgttttgctatgaccgagttacatcatggt 606