Jatropha Genome Database

JcCB0139081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0139081.10 + phase: 1 /partial
         (422 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29381.m000075 conserved hypothetical protein                          157   6e-38

>29381.m000075 conserved hypothetical protein
          Length = 372

 Score =  157 bits (79), Expect = 6e-38
 Identities = 128/143 (89%), Gaps = 1/143 (0%)
 Strand = Plus / Plus

                                                                       
Query: 253 atgggagacactgctcttatttcagaagggtccctgcacgagttttacc-agaaggtgct 311
           ||||| |||||||||||||||||||||| ||||||| | ||||| |||| ||||||||||
Sbjct: 1   atgggcgacactgctcttatttcagaagagtccctggaagagttctacccagaaggtgct 60

                                                                       
Query: 312 gctgaattgtgtggcatacaaccttcagaagtggcatggttagaagaaactccgcctcca 371
           |||||||||||||||||| |||| || |||||  ||||||||||||||||||  ||||| 
Sbjct: 61  gctgaattgtgtggcatagaaccatctgaagtaacatggttagaagaaactcaacctccg 120

                                  
Query: 372 gaaaactttgtggtgcagagggg 394
           |||||||||||||||||| ||||
Sbjct: 121 gaaaactttgtggtgcagcgggg 143