Jatropha Genome Database
- JcCB0138801.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0138801.10 + phase: 0 /partial
(455 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30054.m000794 ribose-phosphate pyrophosphokinase, putative 210 5e-54
30054.m000790 ribose-phosphate pyrophosphokinase, putative 121 4e-27
29709.m001223 ribose-phosphate pyrophosphokinase, putative 86 2e-16
>30054.m000794 ribose-phosphate pyrophosphokinase, putative
Length = 1056
Score = 210 bits (106), Expect = 5e-54
Identities = 229/270 (84%)
Strand = Plus / Plus
Query: 186 gaatgggaagcctagtattcctattcttaatgaaagaacactgcccaagttcttggaatc 245
|||||||||||| |||| ||||| | | |||||| | |||||||| ||||| ||||||||
Sbjct: 21 gaatgggaagccaagtagtcctactatcaatgaacggacactgccaaagtttttggaatc 80
Query: 246 tgcccgcatggagaaatcagttaacagaaatagtacgaggctgaagttgttttctggctc 305
||| | | |||||||| ||||| |||| || || | | || ||||||||||||||
Sbjct: 81 tgcacttactgagaaatctgttaaaagaagcagcaccaaaattaaattgttttctggctc 140
Query: 306 tgcaaatcctgctctttctcaggaaattgcttggtatatgggcctcgaattaggaaagat 365
||| ||||| |||||||||||||||||||||| | ||||||| || ||| | |||||| |
Sbjct: 141 tgctaatcccgctctttctcaggaaattgcttcgaatatggggctggaactgggaaaggt 200
Query: 366 caacataaaacgatttgctgatggtgaaatttatgtccagttgcaagaaagtgttagagg 425
|||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 201 caacatcaaacgatttgctgatggtgaaatctatgttcaattgcaagaaagtgttagagg 260
Query: 426 atgtgatgtatatctattacaaccaacctg 455
||||||||| |||||||| || ||||||||
Sbjct: 261 atgtgatgtgtatctattgcagccaacctg 290
>30054.m000790 ribose-phosphate pyrophosphokinase, putative
Length = 1188
Score = 121 bits (61), Expect = 4e-27
Identities = 133/157 (84%)
Strand = Plus / Plus
Query: 287 tgaagttgttttctggctctgcaaatcctgctctttctcaggaaattgcttggtatatgg 346
|||| |||||||||||||| || || || ||||||||||||||||||| | | | |||
Sbjct: 254 tgaaattgttttctggctcagctaacccctctctttctcaggaaattgcctcgagtttgg 313
Query: 347 gcctcgaattaggaaagatcaacataaaacgatttgctgatggtgaaatttatgtccagt 406
| | ||| | |||| |||||||| |||||||||||||||||||||||||||| | || |
Sbjct: 314 ggttggaactgggaatgatcaacacaaaacgatttgctgatggtgaaatttatcttcaat 373
Query: 407 tgcaagaaagtgttagaggatgtgatgtatatctatt 443
|| |||| |||||||||||||||||||| ||||||||
Sbjct: 374 tgaaagagagtgttagaggatgtgatgtgtatctatt 410
>29709.m001223 ribose-phosphate pyrophosphokinase, putative
Length = 1125
Score = 85.7 bits (43), Expect = 2e-16
Identities = 116/139 (83%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 295 ttttctggctctgcaaatcctgctctttctcaggaaattgcttggtatatgggcctcgaa 354
||||||||| |||| ||||||||||| |||||||||||||| || || ||||| | ||
Sbjct: 280 ttttctggcactgccaatcctgctctctctcaggaaattgcgtgctacatgggtttggag 339
Query: 355 ttaggaaagatcaacataaaacgatttgctgatggtgaaatttatgtccagttgcaagaa 414
| |||||||| || || || || |||||||| |||||||||||||| || ||||||| |
Sbjct: 340 cttggaaagattaaaatcaagcgttttgctgacggtgaaatttatgttcaattgcaag-a 398
Query: 415 agtgttagaggatgtgatg 433
||||| |||||||| ||||
Sbjct: 399 agtgtcagaggatgcgatg 417