Jatropha Genome Database
- JcCB0136181.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0136181.30 - phase: 0 /partial
(549 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004749 r2r3-myb transcription factor, putative 276 1e-73
28154.m000040 r2r3-myb transcription factor, putative 86 3e-16
30147.m013885 r2r3-myb transcription factor, putative 72 4e-12
29680.m001686 r2r3-myb transcription factor, putative 58 6e-08
28271.m000023 DNA binding protein, putative 58 6e-08
29889.m003258 r2r3-myb transcription factor, putative 56 2e-07
30225.m001683 r2r3-myb transcription factor, putative 56 2e-07
30076.m004682 r2r3-myb transcription factor, putative 52 4e-06
>29929.m004749 r2r3-myb transcription factor, putative
Length = 441
Score = 276 bits (139), Expect = 1e-73
Identities = 216/242 (89%)
Strand = Plus / Plus
Query: 31 ttattaaggtgtgggaagagttgcagattgagatggatgaattacttgaggcctgatctt 90
|||||||| ||||| ||||| |||||||||||||||||||||||| |||| |||||| |
Sbjct: 136 ttattaagatgtggaaagagctgcagattgagatggatgaattacctgagacctgatttg 195
Query: 91 aaaagaggagctttaacagaancagaagaagatcaaataatcgaactccattcgcgtttg 150
|| |||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||
Sbjct: 196 aagagaggagcattaacagaagctgaagaagatcaaatcatcgaactccattcgcgtttg 255
Query: 151 ggtaacaggtggtctaaaattgctgcacattttccaggccgtacagataatgaaataaag 210
|| |||| |||||| || ||||||||||||||||||||| | ||||||||||| || ||
Sbjct: 256 ggaaacaagtggtcaaagattgctgcacattttccaggcagaacagataatgagattaaa 315
Query: 211 aaccattggaatacaagaattaagaagaaactaaagattcttggtatagacccacaaacc 270
|||||||||||||||||||| |||||||||||||||| ||| ||| ||||||| ||||||
Sbjct: 316 aaccattggaatacaagaatcaagaagaaactaaagactctgggtgtagaccctcaaacc 375
Query: 271 ca 272
||
Sbjct: 376 ca 377
>28154.m000040 r2r3-myb transcription factor, putative
Length = 906
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 40 tgtgggaagagttgcagattgagatggatgaattacttgaggcctgatcttaaaagagg 98
||||| |||||||||||| | |||||||| |||||||||||||||||||||||||||||
Sbjct: 145 tgtggcaagagttgcagactcagatggataaattacttgaggcctgatcttaaaagagg 203
>30147.m013885 r2r3-myb transcription factor, putative
Length = 1137
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 36 aaggtgtgggaagagttgcagattgagatggatgaattacttgaggcctgatcttaaaag 95
||||||||| ||||||||||||||||||||||| || ||||| || ||||| ||||| ||
Sbjct: 141 aaggtgtggaaagagttgcagattgagatggattaactacttaagacctgaccttaagag 200
Query: 96 agga 99
||||
Sbjct: 201 agga 204
>29680.m001686 r2r3-myb transcription factor, putative
Length = 543
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 27 aggtttattaaggtgtgggaagagttgcagattgagatggatgaattacttgaggcctga 86
|||| ||||||||||||| ||||||||||| | |||||||| || ||| ||||||| ||
Sbjct: 132 aggtatattaaggtgtggaaagagttgcaggcttagatggataaactacctgaggccaga 191
Query: 87 tcttaaaagagga 99
| ||||| |||||
Sbjct: 192 tattaaacgagga 204
>28271.m000023 DNA binding protein, putative
Length = 781
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 148 ttgggtaacaggtggtctaaaattgctgcacattttccaggccgtacagataatgaaata 207
||||||||||||||||| |||||||| ||||| ||||| | ||||||||||||||
Sbjct: 295 ttgggtaacaggtggtcgaaaattgcacagcatttaccaggaagaacagataatgaaatc 354
Query: 208 aagaaccattgga 220
|||||| ||||||
Sbjct: 355 aagaactattgga 367
>29889.m003258 r2r3-myb transcription factor, putative
Length = 996
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 34 ttaaggtgtgggaagagttgcagattgagatggatgaattactt 77
||||||||||| |||||||||||| |||||||||| || |||||
Sbjct: 139 ttaaggtgtggcaagagttgcagactgagatggattaactactt 182
>30225.m001683 r2r3-myb transcription factor, putative
Length = 657
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 27 aggtttattaaggtgtgggaagagttgcagattgagatggatgaatta 74
|||| ||| |||||| |||||||||||||||||| ||||| |||||||
Sbjct: 132 aggtctatcaaggtgcgggaagagttgcagattgcgatggttgaatta 179
>30076.m004682 r2r3-myb transcription factor, putative
Length = 282
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 31 ttattaaggtgtgggaagagttgcagattgagatggat 68
||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 136 ttattgaggtgtgggaaaagttgcagactgagatggat 173