Jatropha Genome Database
- JcCB0135511.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0135511.10 - phase: 2 /partial
(742 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30078.m002288 Transcription factor Dp-1, putative 622 e-178
>30078.m002288 Transcription factor Dp-1, putative
Length = 1083
Score = 622 bits (314), Expect = e-178
Identities = 475/528 (89%), Gaps = 3/528 (0%)
Strand = Plus / Plus
Query: 63 ccaggtcttggggaaacaccacggtctcgggt---caatcagtatcgaccagtggcagcg 119
||||||| ||||| |||||||| ||||| ||| ||||| || || || ||||||||||
Sbjct: 77 ccaggtcatggggtaacaccactgtctccggtggtcaatcggtgtctactagtggcagcg 136
Query: 120 ttggctccccttctagtcggagcgagcaagccatggctacgccggcaagtgatagcactt 179
| || || |||||||| ||||| || |||||||||||||| || || ||||| |||||||
Sbjct: 137 tgggttcaccttctagccggagtgaacaagccatggctacacctgctagtgacagcactt 196
Query: 180 ttcttaggttgaaccatcttgacattcacgccgacgatgcggccacccaagatgccgctg 239
|||||||||| |||||||| ||||||||||| || ||||| ||||| |||||||| ||||
Sbjct: 197 ttcttaggttaaaccatctggacattcacgctgatgatgctgccactcaagatgctgctg 256
Query: 240 ctaacaagaagaaaaagagaggtcaacgggcagctggagctgataagagtggtagaggac 299
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 257 ctaacaagaagaaaaagagaggtcaacgggcagttggagctgataagagtggtagaggac 316
Query: 300 tccggcaatttagtatgaaagtgtgtgaaaaagtggaaagtaaaggaacaaccacttaca 359
|||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 317 tccgtcaatttagtatgaaagtgtgcgaaaaagttgaaagtaaaggaacaaccacataca 376
Query: 360 atgaggtggcagatgaacttgttgcagagtttgctgacccgagcaacagtgtttcatctc 419
| ||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||
Sbjct: 377 acgaggtggcagatgaactcgtagcagagttcgctgaccctggcaacagtgtttcatctc 436
Query: 420 cagaccagcagcaatatgacgagaaaaatatacgacgaagagtatatgatgcccttaatg 479
|||| ||||| |||||||| |||||||| ||| | ||||| |||||||||||||| ||||
Sbjct: 437 cagatcagcaacaatatgatgagaaaaacataaggcgaagggtatatgatgccctgaatg 496
Query: 480 tactcatggcgttggatatcatatccaaggataaaaaggaaatacaatggaaaggtcttc 539
|||||||||| || ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 497 tactcatggcattagatatcatatctaaggataagaaggaaatacaatggaaaggtcttc 556
Query: 540 ctcgaactagcctgagtgatattgaagaattaaaggctgaacgtcttg 587
|||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 557 ctcgaactagcctgagtgatatcgaagaattaaaggctgagcgtcttg 604
Score = 141 bits (71), Expect = 7e-33
Identities = 89/95 (93%)
Strand = Plus / Plus
Query: 648 taggtcttcagaacctgattaatcgaaatgagcaactatacagctcaggaaatgctccta 707
||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| |
Sbjct: 680 taggtcttcagaacctgataaatcgaaatgagcagctatacaactcaggaaatgctccca 739
Query: 708 gtgggggtgtgtccttgccttttattttggtgcag 742
|||||||||||||||| ||||||||| ||||||||
Sbjct: 740 gtgggggtgtgtccttaccttttattctggtgcag 774